Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TCF4P15884 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.77■■□□□ 1.07
TCF4P15884 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TCF4P15884 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
TCF4P15884 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TCF4P15884 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
TCF4P15884 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
TCF4P15884 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
TCF4P15884 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TCF4P15884 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TCF4P15884 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.76■■□□□ 1.07
TCF4P15884 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.76■■□□□ 1.07
TCF4P15884 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TCF4P15884 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.76■■□□□ 1.07
TCF4P15884 AC004854.2-201ENST00000608450 1441 ntBASIC21.76■■□□□ 1.07
TCF4P15884 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.76■■□□□ 1.07
TCF4P15884 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TCF4P15884 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.76■■□□□ 1.07
TCF4P15884 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TCF4P15884 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
TCF4P15884 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.75■■□□□ 1.07
TCF4P15884 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCF4P15884 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.75■■□□□ 1.07
TCF4P15884 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCF4P15884 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.75■■□□□ 1.07
TCF4P15884 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TCF4P15884 AC138907.5-202ENST00000569484 235 ntBASIC21.75■■□□□ 1.07
TCF4P15884 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TCF4P15884 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TCF4P15884 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TCF4P15884 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TCF4P15884 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCF4P15884 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.75■■□□□ 1.07
TCF4P15884 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCF4P15884 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCF4P15884 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TCF4P15884 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TCF4P15884 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.74■■□□□ 1.07
TCF4P15884 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.74■■□□□ 1.07
TCF4P15884 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.74■■□□□ 1.07
TCF4P15884 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCF4P15884 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCF4P15884 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
TCF4P15884 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TCF4P15884 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
TCF4P15884 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.74■■□□□ 1.07
TCF4P15884 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.74■■□□□ 1.07
TCF4P15884 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCF4P15884 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.73■■□□□ 1.07
TCF4P15884 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TCF4P15884 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCF4P15884 AC006128.1-201ENST00000624704 1661 ntBASIC21.73■■□□□ 1.07
TCF4P15884 AP004607.4-201ENST00000530158 1459 ntBASIC21.73■■□□□ 1.07
TCF4P15884 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCF4P15884 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCF4P15884 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.73■■□□□ 1.07
TCF4P15884 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCF4P15884 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.73■■□□□ 1.07
TCF4P15884 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCF4P15884 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TCF4P15884 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.73■■□□□ 1.07
TCF4P15884 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCF4P15884 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.73■■□□□ 1.07
TCF4P15884 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCF4P15884 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCF4P15884 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TCF4P15884 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TCF4P15884 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TCF4P15884 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TCF4P15884 AC010141.2-201ENST00000452426 721 ntBASIC21.72■■□□□ 1.07
TCF4P15884 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.72■■□□□ 1.07
TCF4P15884 SLC7A5P2-201ENST00000553010 536 ntBASIC21.72■■□□□ 1.07
TCF4P15884 DUX4L2-201ENST00000561772 1275 ntBASIC21.72■■□□□ 1.07
TCF4P15884 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.72■■□□□ 1.07
TCF4P15884 DUX4L6-201ENST00000626483 1275 ntBASIC21.72■■□□□ 1.07
TCF4P15884 DUX4L1-201ENST00000627662 1275 ntBASIC21.72■■□□□ 1.07
TCF4P15884 DUX4L8-201ENST00000629013 1275 ntBASIC21.72■■□□□ 1.07
TCF4P15884 DUX4L3-201ENST00000630187 1275 ntBASIC21.72■■□□□ 1.07
TCF4P15884 DUX4L7-201ENST00000630678 1275 ntBASIC21.72■■□□□ 1.07
TCF4P15884 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TCF4P15884 DUX4L5-201ENST00000630834 1275 ntBASIC21.72■■□□□ 1.07
TCF4P15884 AC121338.2-201ENST00000622535 1744 ntBASIC21.72■■□□□ 1.07
TCF4P15884 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.71■■□□□ 1.07
TCF4P15884 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.71■■□□□ 1.07
TCF4P15884 AC092667.1-201ENST00000434301 2586 ntBASIC21.71■■□□□ 1.07
TCF4P15884 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TCF4P15884 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TCF4P15884 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TCF4P15884 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.71■■□□□ 1.07
TCF4P15884 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
TCF4P15884 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.71■■□□□ 1.07
TCF4P15884 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.71■■□□□ 1.07
TCF4P15884 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.71■■□□□ 1.07
TCF4P15884 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.71■■□□□ 1.07
TCF4P15884 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.71■■□□□ 1.07
TCF4P15884 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TCF4P15884 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.71■■□□□ 1.07
TCF4P15884 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TCF4P15884 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TCF4P15884 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms