Protein–RNA interactions for Protein: P0C2I9

TY1B-PR1, Transposon Ty1-PR1 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR1P0C2I9 tF(GAA)MtF(GAA)M 73 nt1.94□□□□□ -2.1
TY1B-PR1P0C2I9 tF(GAA)P1tF(GAA)P1 73 nt1.94□□□□□ -2.1
TY1B-PR1P0C2I9 tF(GAA)P2tF(GAA)P2 73 nt1.94□□□□□ -2.1
TY1B-PR1P0C2I9 MMS22YLR320W 4365 nt1.94□□□□□ -2.1
TY1B-PR1P0C2I9 SMP3YOR149C 1551 nt1.94□□□□□ -2.1
TY1B-PR1P0C2I9 VPS38YLR360W 1320 nt1.94□□□□□ -2.1
TY1B-PR1P0C2I9 PET100YDR079W 336 nt1.93□□□□□ -2.1
TY1B-PR1P0C2I9 EAF7YNL136W 1278 nt1.93□□□□□ -2.1
TY1B-PR1P0C2I9 CTM1YHR109W 1758 nt1.93□□□□□ -2.1
TY1B-PR1P0C2I9 VPS15YBR097W 4365 nt1.93□□□□□ -2.1
TY1B-PR1P0C2I9 YJR061WYJR061W 2808 nt1.93□□□□□ -2.1
TY1B-PR1P0C2I9 AAR2YBL074C 1068 nt1.93□□□□□ -2.1
TY1B-PR1P0C2I9 CRS5YOR031W 210 nt1.93□□□□□ -2.1
TY1B-PR1P0C2I9 HOP1YIL072W 1818 nt1.92□□□□□ -2.1
TY1B-PR1P0C2I9 NPL4YBR170C 1743 nt1.92□□□□□ -2.1
TY1B-PR1P0C2I9 MCM21YDR318W 1107 nt1.92□□□□□ -2.1
TY1B-PR1P0C2I9 FRQ1YDR373W 573 nt1.92□□□□□ -2.1
TY1B-PR1P0C2I9 MBA1YBR185C 837 nt1.92□□□□□ -2.1
TY1B-PR1P0C2I9 RLI1YDR091C 1827 nt1.92□□□□□ -2.1
TY1B-PR1P0C2I9 DSE4YNR067C 3354 nt1.91□□□□□ -2.1
TY1B-PR1P0C2I9 RRF1YHR038W 693 nt1.91□□□□□ -2.1
TY1B-PR1P0C2I9 CYC2YOR037W 1101 nt1.91□□□□□ -2.1
TY1B-PR1P0C2I9 YHR214C-CYHR214C-C 1437 nt1.91□□□□□ -2.1
TY1B-PR1P0C2I9 CNM67YNL225C 1746 nt1.91□□□□□ -2.1
TY1B-PR1P0C2I9 YCK2YNL154C 1641 nt1.9□□□□□ -2.1
TY1B-PR1P0C2I9 EST3YIL009C-A 546 nt1.9□□□□□ -2.1
TY1B-PR1P0C2I9 YOL166CYOL166C 339 nt1.9□□□□□ -2.1
TY1B-PR1P0C2I9 YRR1YOR162C 2433 nt1.9□□□□□ -2.11
TY1B-PR1P0C2I9 NDC80YIL144W 2076 nt1.9□□□□□ -2.11
TY1B-PR1P0C2I9 MRPL9YGR220C 810 nt1.9□□□□□ -2.11
TY1B-PR1P0C2I9 COS6YGR295C 1146 nt1.9□□□□□ -2.11
TY1B-PR1P0C2I9 YIL156W-AYIL156W-A 402 nt1.9□□□□□ -2.11
TY1B-PR1P0C2I9 RMP1YLR145W 606 nt1.9□□□□□ -2.11
TY1B-PR1P0C2I9 snR3snR3 194 nt1.9□□□□□ -2.11
TY1B-PR1P0C2I9 MRPL27YBR282W 441 nt1.9□□□□□ -2.11
TY1B-PR1P0C2I9 GRX1YCL035C 333 nt1.9□□□□□ -2.11
TY1B-PR1P0C2I9 SEC15YGL233W 2733 nt1.9□□□□□ -2.11
TY1B-PR1P0C2I9 SOK1YDR006C 2706 nt1.89□□□□□ -2.11
TY1B-PR1P0C2I9 YCK3YER123W 1575 nt1.89□□□□□ -2.11
TY1B-PR1P0C2I9 VPH2YKL119C 648 nt1.89□□□□□ -2.11
TY1B-PR1P0C2I9 ESF2YNR054C 951 nt1.89□□□□□ -2.11
TY1B-PR1P0C2I9 PLP1YDR183W 693 nt1.88□□□□□ -2.11
TY1B-PR1P0C2I9 DCG1YIR030C 735 nt1.88□□□□□ -2.11
TY1B-PR1P0C2I9 IST1YNL265C 897 nt1.88□□□□□ -2.11
TY1B-PR1P0C2I9 HAL1YPR005C 885 nt1.88□□□□□ -2.11
TY1B-PR1P0C2I9 YGR237CYGR237C 2358 nt1.88□□□□□ -2.11
TY1B-PR1P0C2I9 RDS2YPL133C 1341 nt1.88□□□□□ -2.11
TY1B-PR1P0C2I9 SIP4YJL089W 2490 nt1.88□□□□□ -2.11
TY1B-PR1P0C2I9 ISW2YOR304W 3363 nt1.88□□□□□ -2.11
TY1B-PR1P0C2I9 MSN5YDR335W 3675 nt1.88□□□□□ -2.11
TY1B-PR1P0C2I9 UBC6YER100W 753 nt1.87□□□□□ -2.11
TY1B-PR1P0C2I9 RPS29AYLR388W 171 nt1.87□□□□□ -2.11
TY1B-PR1P0C2I9 REG1YDR028C 3045 nt1.87□□□□□ -2.11
TY1B-PR1P0C2I9 PKH3YDR466W 2697 nt1.87□□□□□ -2.11
TY1B-PR1P0C2I9 STP1YDR463W 1560 nt1.87□□□□□ -2.11
TY1B-PR1P0C2I9 DBP5YOR046C 1449 nt1.87□□□□□ -2.11
TY1B-PR1P0C2I9 YOR292CYOR292C 930 nt1.87□□□□□ -2.11
TY1B-PR1P0C2I9 SPH1YLR313C 1593 nt1.87□□□□□ -2.11
TY1B-PR1P0C2I9 ARG2YJL071W 1725 nt1.86□□□□□ -2.11
TY1B-PR1P0C2I9 ATP25YMR098C 1839 nt1.86□□□□□ -2.11
TY1B-PR1P0C2I9 YCR087C-AYCR087C-A 462 nt1.86□□□□□ -2.11
TY1B-PR1P0C2I9 YOR029WYOR029W 336 nt1.86□□□□□ -2.11
TY1B-PR1P0C2I9 IRC21YMR073C 606 nt1.85□□□□□ -2.11
TY1B-PR1P0C2I9 AEP2YMR282C 1743 nt1.85□□□□□ -2.11
TY1B-PR1P0C2I9 INP51YIL002C 2841 nt1.85□□□□□ -2.11
TY1B-PR1P0C2I9 YJR003CYJR003C 1560 nt1.85□□□□□ -2.11
TY1B-PR1P0C2I9 MIC60YKR016W 1623 nt1.85□□□□□ -2.11
TY1B-PR1P0C2I9 CDC53YDL132W 2448 nt1.85□□□□□ -2.11
TY1B-PR1P0C2I9 TCM62YBR044C 1719 nt1.84□□□□□ -2.11
TY1B-PR1P0C2I9 CIK1YMR198W 1785 nt1.84□□□□□ -2.11
TY1B-PR1P0C2I9 OCT1YKL134C 2319 nt1.84□□□□□ -2.11
TY1B-PR1P0C2I9 FYV8YGR196C 2454 nt1.84□□□□□ -2.12
TY1B-PR1P0C2I9 SHE2YKL130C 741 nt1.84□□□□□ -2.12
TY1B-PR1P0C2I9 AFI1YOR129C 2682 nt1.84□□□□□ -2.12
TY1B-PR1P0C2I9 YDR179W-AYDR179W-A 1392 nt1.84□□□□□ -2.12
TY1B-PR1P0C2I9 BUR6YER159C 429 nt1.83□□□□□ -2.12
TY1B-PR1P0C2I9 YBR089WYBR089W 600 nt1.83□□□□□ -2.12
TY1B-PR1P0C2I9 KCS1YDR017C 3153 nt1.83□□□□□ -2.12
TY1B-PR1P0C2I9 YDL073WYDL073W 2955 nt1.83□□□□□ -2.12
TY1B-PR1P0C2I9 MRE11YMR224C 2079 nt1.83□□□□□ -2.12
TY1B-PR1P0C2I9 PRM2YIL037C 1971 nt1.83□□□□□ -2.12
TY1B-PR1P0C2I9 YCR050CYCR050C 309 nt1.82□□□□□ -2.12
TY1B-PR1P0C2I9 DDI2YFL061W 678 nt1.82□□□□□ -2.12
TY1B-PR1P0C2I9 CTP1YBR291C 900 nt1.82□□□□□ -2.12
TY1B-PR1P0C2I9 YFL002W-AYFL002W-A 5313 nt1.82□□□□□ -2.12
TY1B-PR1P0C2I9 YGR161W-BYGR161W-B 5313 nt1.82□□□□□ -2.12
TY1B-PR1P0C2I9 YCL019WYCL019W 5313 nt1.82□□□□□ -2.12
TY1B-PR1P0C2I9 SPP382YLR424W 2127 nt1.82□□□□□ -2.12
TY1B-PR1P0C2I9 UBR1YGR184C 5853 nt1.82□□□□□ -2.12
TY1B-PR1P0C2I9 QCR9YGR183C 201 nt1.82□□□□□ -2.12
TY1B-PR1P0C2I9 RPL33BYOR234C 324 nt1.82□□□□□ -2.12
TY1B-PR1P0C2I9 YLR035C-AYLR035C-A 3468 nt1.81□□□□□ -2.12
TY1B-PR1P0C2I9 SPO22YIL073C 2928 nt1.81□□□□□ -2.12
TY1B-PR1P0C2I9 ZRG17YNR039C 1818 nt1.81□□□□□ -2.12
TY1B-PR1P0C2I9 RPN9YDR427W 1182 nt1.81□□□□□ -2.12
TY1B-PR1P0C2I9 YER023C-AYER023C-A 213 nt1.81□□□□□ -2.12
TY1B-PR1P0C2I9 PRP18YGR006W 756 nt1.81□□□□□ -2.12
TY1B-PR1P0C2I9 RGP1YDR137W 1992 nt1.81□□□□□ -2.12
TY1B-PR1P0C2I9 PRP38YGR075C 729 nt1.8□□□□□ -2.12
TY1B-PR1P0C2I9 SPO13YHR014W 876 nt1.8□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 77.5 ms