Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CD48P09326 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CD48P09326 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CD48P09326 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.61■■□□□ 1.05
CD48P09326 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CD48P09326 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CD48P09326 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.61■■□□□ 1.05
CD48P09326 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CD48P09326 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.61■■□□□ 1.05
CD48P09326 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.61■■□□□ 1.05
CD48P09326 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CD48P09326 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
CD48P09326 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CD48P09326 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CD48P09326 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CD48P09326 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CD48P09326 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
CD48P09326 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CD48P09326 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CD48P09326 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CD48P09326 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
CD48P09326 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.6■■□□□ 1.05
CD48P09326 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.6■■□□□ 1.05
CD48P09326 AC010141.2-201ENST00000452426 721 ntBASIC21.6■■□□□ 1.05
CD48P09326 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.6■■□□□ 1.05
CD48P09326 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CD48P09326 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.6■■□□□ 1.05
CD48P09326 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CD48P09326 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.6■■□□□ 1.05
CD48P09326 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CD48P09326 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.6■■□□□ 1.05
CD48P09326 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CD48P09326 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
CD48P09326 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.6■■□□□ 1.05
CD48P09326 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CD48P09326 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CD48P09326 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CD48P09326 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CD48P09326 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD48P09326 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD48P09326 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.59■■□□□ 1.05
CD48P09326 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD48P09326 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD48P09326 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CD48P09326 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CD48P09326 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.59■■□□□ 1.05
CD48P09326 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD48P09326 SLC7A5P2-201ENST00000553010 536 ntBASIC21.59■■□□□ 1.05
CD48P09326 DUX4L2-201ENST00000561772 1275 ntBASIC21.59■■□□□ 1.05
CD48P09326 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.59■■□□□ 1.05
CD48P09326 AC008175.2-201ENST00000612840 297 ntBASIC21.59■■□□□ 1.05
CD48P09326 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.59■■□□□ 1.05
CD48P09326 DUX4L6-201ENST00000626483 1275 ntBASIC21.59■■□□□ 1.05
CD48P09326 DUX4L1-201ENST00000627662 1275 ntBASIC21.59■■□□□ 1.05
CD48P09326 DUX4L8-201ENST00000629013 1275 ntBASIC21.59■■□□□ 1.05
CD48P09326 DUX4L3-201ENST00000630187 1275 ntBASIC21.59■■□□□ 1.05
CD48P09326 DUX4L7-201ENST00000630678 1275 ntBASIC21.59■■□□□ 1.05
CD48P09326 DUX4L5-201ENST00000630834 1275 ntBASIC21.59■■□□□ 1.05
CD48P09326 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD48P09326 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD48P09326 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
CD48P09326 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CD48P09326 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.59■■□□□ 1.05
CD48P09326 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD48P09326 SLC25A24-204ENST00000569674 2357 ntBASIC21.59■■□□□ 1.05
CD48P09326 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CD48P09326 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CD48P09326 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CD48P09326 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CD48P09326 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CD48P09326 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CD48P09326 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CD48P09326 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.58■■□□□ 1.05
CD48P09326 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.58■■□□□ 1.05
CD48P09326 POU5F1P4-201ENST00000413175 1085 ntBASIC21.58■■□□□ 1.05
CD48P09326 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.58■■□□□ 1.05
CD48P09326 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CD48P09326 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.58■■□□□ 1.05
CD48P09326 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.58■■□□□ 1.05
CD48P09326 AC006128.1-201ENST00000624704 1661 ntBASIC21.58■■□□□ 1.05
CD48P09326 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.58■■□□□ 1.04
CD48P09326 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CD48P09326 AC121338.2-201ENST00000622535 1744 ntBASIC21.58■■□□□ 1.04
CD48P09326 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CD48P09326 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CD48P09326 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CD48P09326 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CD48P09326 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CD48P09326 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.57■■□□□ 1.04
CD48P09326 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
CD48P09326 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.57■■□□□ 1.04
CD48P09326 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.57■■□□□ 1.04
CD48P09326 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.57■■□□□ 1.04
CD48P09326 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CD48P09326 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.57■■□□□ 1.04
CD48P09326 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CD48P09326 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CD48P09326 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.57■■□□□ 1.04
CD48P09326 AP001160.3-201ENST00000601484 763 ntBASIC21.57■■□□□ 1.04
CD48P09326 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms