Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ERCC1P07992 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ERCC1P07992 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.42■□□□□ 0.54
ERCC1P07992 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.42■□□□□ 0.54
ERCC1P07992 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC1P07992 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC1P07992 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC1P07992 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.41■□□□□ 0.54
ERCC1P07992 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC1P07992 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC1P07992 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
ERCC1P07992 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ERCC1P07992 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ERCC1P07992 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC1P07992 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
ERCC1P07992 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC1P07992 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.4■□□□□ 0.54
ERCC1P07992 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ERCC1P07992 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.4■□□□□ 0.54
ERCC1P07992 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC1P07992 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.4■□□□□ 0.54
ERCC1P07992 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.4■□□□□ 0.54
ERCC1P07992 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ERCC1P07992 AC026471.6-201ENST00000622954 1905 ntBASIC18.4■□□□□ 0.54
ERCC1P07992 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.4■□□□□ 0.54
ERCC1P07992 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ERCC1P07992 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ERCC1P07992 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.4■□□□□ 0.54
ERCC1P07992 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC1P07992 AC009237.3-201ENST00000393279 1427 ntBASIC18.4■□□□□ 0.54
ERCC1P07992 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC1P07992 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.4■□□□□ 0.54
ERCC1P07992 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
ERCC1P07992 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ERCC1P07992 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.39■□□□□ 0.53
ERCC1P07992 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.39■□□□□ 0.53
ERCC1P07992 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC1P07992 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ERCC1P07992 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC1P07992 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC1P07992 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ERCC1P07992 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.39■□□□□ 0.53
ERCC1P07992 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.39■□□□□ 0.53
ERCC1P07992 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.39■□□□□ 0.53
ERCC1P07992 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.39■□□□□ 0.53
ERCC1P07992 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC1P07992 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.39■□□□□ 0.53
ERCC1P07992 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
ERCC1P07992 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.39■□□□□ 0.53
ERCC1P07992 TPRG1LP1-201ENST00000598702 760 ntBASIC18.39■□□□□ 0.53
ERCC1P07992 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.39■□□□□ 0.53
ERCC1P07992 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC1P07992 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC1P07992 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC1P07992 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC1P07992 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.39■□□□□ 0.53
ERCC1P07992 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC1P07992 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ERCC1P07992 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC1P07992 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.38■□□□□ 0.53
ERCC1P07992 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ERCC1P07992 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC1P07992 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC1P07992 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
ERCC1P07992 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC1P07992 AC079140.4-201ENST00000507448 529 ntBASIC18.38■□□□□ 0.53
ERCC1P07992 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC1P07992 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.38■□□□□ 0.53
ERCC1P07992 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.38■□□□□ 0.53
ERCC1P07992 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.38■□□□□ 0.53
ERCC1P07992 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC1P07992 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC1P07992 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.38■□□□□ 0.53
ERCC1P07992 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.38■□□□□ 0.53
ERCC1P07992 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC1P07992 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC1P07992 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC1P07992 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ERCC1P07992 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.38■□□□□ 0.53
ERCC1P07992 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.38■□□□□ 0.53
ERCC1P07992 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.38■□□□□ 0.53
ERCC1P07992 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.38■□□□□ 0.53
ERCC1P07992 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC1P07992 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC1P07992 AF106564.1-201ENST00000607058 2553 ntBASIC18.37■□□□□ 0.53
ERCC1P07992 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.37■□□□□ 0.53
ERCC1P07992 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
ERCC1P07992 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC1P07992 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.37■□□□□ 0.53
ERCC1P07992 KRT19P1-201ENST00000405746 1186 ntBASIC18.37■□□□□ 0.53
ERCC1P07992 AC016769.1-201ENST00000409132 1010 ntBASIC18.37■□□□□ 0.53
ERCC1P07992 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.37■□□□□ 0.53
ERCC1P07992 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC1P07992 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC1P07992 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC1P07992 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC1P07992 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC1P07992 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC1P07992 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC1P07992 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms