Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
HLA-DRAP01903 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
HLA-DRAP01903 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HLA-DRAP01903 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HLA-DRAP01903 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.45■■□□□ 1.18
HLA-DRAP01903 AC006015.1-201ENST00000429970 570 ntBASIC22.45■■□□□ 1.18
HLA-DRAP01903 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HLA-DRAP01903 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.45■■□□□ 1.18
HLA-DRAP01903 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.45■■□□□ 1.18
HLA-DRAP01903 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.45■■□□□ 1.18
HLA-DRAP01903 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HLA-DRAP01903 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.45■■□□□ 1.18
HLA-DRAP01903 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
HLA-DRAP01903 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.45■■□□□ 1.18
HLA-DRAP01903 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.45■■□□□ 1.18
HLA-DRAP01903 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
HLA-DRAP01903 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.45■■□□□ 1.18
HLA-DRAP01903 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HLA-DRAP01903 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.45■■□□□ 1.18
HLA-DRAP01903 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HLA-DRAP01903 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HLA-DRAP01903 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
HLA-DRAP01903 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
HLA-DRAP01903 AC245052.3-201ENST00000450182 901 ntBASIC22.44■■□□□ 1.18
HLA-DRAP01903 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.44■■□□□ 1.18
HLA-DRAP01903 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
HLA-DRAP01903 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.44■■□□□ 1.18
HLA-DRAP01903 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.44■■□□□ 1.18
HLA-DRAP01903 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HLA-DRAP01903 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.43■■□□□ 1.18
HLA-DRAP01903 KRT18P11-201ENST00000435214 1283 ntBASIC22.43■■□□□ 1.18
HLA-DRAP01903 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.43■■□□□ 1.18
HLA-DRAP01903 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
HLA-DRAP01903 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.43■■□□□ 1.18
HLA-DRAP01903 IKBKGP1-201ENST00000612193 1073 ntBASIC22.43■■□□□ 1.18
HLA-DRAP01903 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HLA-DRAP01903 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.43■■□□□ 1.18
HLA-DRAP01903 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.43■■□□□ 1.18
HLA-DRAP01903 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
HLA-DRAP01903 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
HLA-DRAP01903 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
HLA-DRAP01903 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.42■■□□□ 1.18
HLA-DRAP01903 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HLA-DRAP01903 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
HLA-DRAP01903 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
HLA-DRAP01903 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
HLA-DRAP01903 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.42■■□□□ 1.18
HLA-DRAP01903 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.42■■□□□ 1.18
HLA-DRAP01903 AC092437.1-201ENST00000624794 1048 ntBASIC22.42■■□□□ 1.18
HLA-DRAP01903 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
HLA-DRAP01903 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
HLA-DRAP01903 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.42■■□□□ 1.18
HLA-DRAP01903 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HLA-DRAP01903 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HLA-DRAP01903 RBM17P2-201ENST00000616397 1405 ntBASIC22.41■■□□□ 1.18
HLA-DRAP01903 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HLA-DRAP01903 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
HLA-DRAP01903 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
HLA-DRAP01903 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
HLA-DRAP01903 MFSD11-216ENST00000590393 1141 ntBASIC22.41■■□□□ 1.18
HLA-DRAP01903 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HLA-DRAP01903 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HLA-DRAP01903 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
HLA-DRAP01903 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
HLA-DRAP01903 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HLA-DRAP01903 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.4■■□□□ 1.18
HLA-DRAP01903 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HLA-DRAP01903 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HLA-DRAP01903 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.4■■□□□ 1.18
HLA-DRAP01903 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HLA-DRAP01903 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.4■■□□□ 1.18
HLA-DRAP01903 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.4■■□□□ 1.18
HLA-DRAP01903 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.4■■□□□ 1.18
HLA-DRAP01903 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
HLA-DRAP01903 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HLA-DRAP01903 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.4■■□□□ 1.18
HLA-DRAP01903 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HLA-DRAP01903 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.39■■□□□ 1.18
HLA-DRAP01903 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.39■■□□□ 1.18
HLA-DRAP01903 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
HLA-DRAP01903 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.39■■□□□ 1.17
HLA-DRAP01903 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HLA-DRAP01903 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HLA-DRAP01903 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.39■■□□□ 1.17
HLA-DRAP01903 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HLA-DRAP01903 AC243732.1-201ENST00000612648 864 ntBASIC22.39■■□□□ 1.17
HLA-DRAP01903 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.39■■□□□ 1.17
HLA-DRAP01903 AC010536.3-201ENST00000620306 533 ntBASIC22.39■■□□□ 1.17
HLA-DRAP01903 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.39■■□□□ 1.17
HLA-DRAP01903 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
HLA-DRAP01903 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HLA-DRAP01903 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
HLA-DRAP01903 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.39■■□□□ 1.17
HLA-DRAP01903 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HLA-DRAP01903 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HLA-DRAP01903 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
HLA-DRAP01903 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HLA-DRAP01903 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.38■■□□□ 1.17
HLA-DRAP01903 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.38■■□□□ 1.17
HLA-DRAP01903 AC011767.1-201ENST00000617410 1153 ntBASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms