Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC24.07■■□□□ 1.44
ALDH1A1P00352 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
ALDH1A1P00352 TK2-204ENST00000525974 1178 ntTSL 2 BASIC24.07■■□□□ 1.44
ALDH1A1P00352 AC113410.3-201ENST00000623366 203 ntBASIC24.07■■□□□ 1.44
ALDH1A1P00352 AL023875.1-201ENST00000640777 796 ntBASIC24.07■■□□□ 1.44
ALDH1A1P00352 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
ALDH1A1P00352 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
ALDH1A1P00352 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ALDH1A1P00352 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ALDH1A1P00352 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
ALDH1A1P00352 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ALDH1A1P00352 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC24.06■■□□□ 1.44
ALDH1A1P00352 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ALDH1A1P00352 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
ALDH1A1P00352 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ALDH1A1P00352 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC24.06■■□□□ 1.44
ALDH1A1P00352 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ALDH1A1P00352 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ALDH1A1P00352 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.06■■□□□ 1.44
ALDH1A1P00352 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ALDH1A1P00352 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC24.06■■□□□ 1.44
ALDH1A1P00352 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ALDH1A1P00352 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ALDH1A1P00352 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
ALDH1A1P00352 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
ALDH1A1P00352 TSPY15P-201ENST00000457163 923 ntBASIC24.05■■□□□ 1.44
ALDH1A1P00352 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC24.05■■□□□ 1.44
ALDH1A1P00352 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC24.05■■□□□ 1.44
ALDH1A1P00352 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC24.05■■□□□ 1.44
ALDH1A1P00352 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ALDH1A1P00352 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ALDH1A1P00352 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.05■■□□□ 1.44
ALDH1A1P00352 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC24.05■■□□□ 1.44
ALDH1A1P00352 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
ALDH1A1P00352 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
ALDH1A1P00352 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
ALDH1A1P00352 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ALDH1A1P00352 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC24.05■■□□□ 1.44
ALDH1A1P00352 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ALDH1A1P00352 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
ALDH1A1P00352 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ALDH1A1P00352 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ALDH1A1P00352 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC24.04■■□□□ 1.44
ALDH1A1P00352 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC24.04■■□□□ 1.44
ALDH1A1P00352 AL355075.4-201ENST00000554988 638 ntBASIC24.04■■□□□ 1.44
ALDH1A1P00352 RARRES2P10-201ENST00000564312 460 ntBASIC24.04■■□□□ 1.44
ALDH1A1P00352 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ALDH1A1P00352 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC24.04■■□□□ 1.44
ALDH1A1P00352 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC24.04■■□□□ 1.44
ALDH1A1P00352 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ALDH1A1P00352 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ALDH1A1P00352 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ALDH1A1P00352 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC24.03■■□□□ 1.44
ALDH1A1P00352 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC24.03■■□□□ 1.44
ALDH1A1P00352 ARMC10P1-201ENST00000313754 855 ntBASIC24.03■■□□□ 1.44
ALDH1A1P00352 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ALDH1A1P00352 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC24.03■■□□□ 1.44
ALDH1A1P00352 AC007322.3-201ENST00000426526 701 ntBASIC24.03■■□□□ 1.44
ALDH1A1P00352 KRT18P35-201ENST00000510488 1269 ntBASIC24.03■■□□□ 1.44
ALDH1A1P00352 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ALDH1A1P00352 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC24.03■■□□□ 1.44
ALDH1A1P00352 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC24.03■■□□□ 1.44
ALDH1A1P00352 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC24.03■■□□□ 1.44
ALDH1A1P00352 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ALDH1A1P00352 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ALDH1A1P00352 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ALDH1A1P00352 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ALDH1A1P00352 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ALDH1A1P00352 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ALDH1A1P00352 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
ALDH1A1P00352 PRKY-204ENST00000533551 1019 ntBASIC24.02■■□□□ 1.44
ALDH1A1P00352 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC24.02■■□□□ 1.44
ALDH1A1P00352 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC24.02■■□□□ 1.44
ALDH1A1P00352 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ALDH1A1P00352 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ALDH1A1P00352 AC137767.1-201ENST00000602918 1920 ntBASIC24.02■■□□□ 1.44
ALDH1A1P00352 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.02■■□□□ 1.44
ALDH1A1P00352 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.02■■□□□ 1.43
ALDH1A1P00352 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.02■■□□□ 1.43
ALDH1A1P00352 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ALDH1A1P00352 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
ALDH1A1P00352 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ALDH1A1P00352 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
ALDH1A1P00352 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ALDH1A1P00352 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC24.01■■□□□ 1.43
ALDH1A1P00352 THEM4-205ENST00000489410 643 ntTSL 2 BASIC24.01■■□□□ 1.43
ALDH1A1P00352 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC24.01■■□□□ 1.43
ALDH1A1P00352 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC24.01■■□□□ 1.43
ALDH1A1P00352 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
ALDH1A1P00352 AC105020.6-201ENST00000621523 1217 ntBASIC24.01■■□□□ 1.43
ALDH1A1P00352 AL590326.2-201ENST00000625139 305 ntBASIC24.01■■□□□ 1.43
ALDH1A1P00352 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ALDH1A1P00352 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ALDH1A1P00352 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ALDH1A1P00352 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ALDH1A1P00352 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.01■■□□□ 1.43
ALDH1A1P00352 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
ALDH1A1P00352 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
ALDH1A1P00352 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ALDH1A1P00352 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms