Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
BEST1O76090 AC007322.4-201ENST00000509611 723 ntBASIC22■■□□□ 1.11
BEST1O76090 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
BEST1O76090 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
BEST1O76090 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.99■■□□□ 1.11
BEST1O76090 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.99■■□□□ 1.11
BEST1O76090 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.99■■□□□ 1.11
BEST1O76090 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.99■■□□□ 1.11
BEST1O76090 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
BEST1O76090 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.99■■□□□ 1.11
BEST1O76090 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
BEST1O76090 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
BEST1O76090 AC091799.1-201ENST00000422823 811 ntBASIC21.99■■□□□ 1.11
BEST1O76090 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.99■■□□□ 1.11
BEST1O76090 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
BEST1O76090 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.99■■□□□ 1.11
BEST1O76090 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
BEST1O76090 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
BEST1O76090 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
BEST1O76090 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
BEST1O76090 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
BEST1O76090 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
BEST1O76090 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
BEST1O76090 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
BEST1O76090 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
BEST1O76090 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.98■■□□□ 1.11
BEST1O76090 NCF1B-203ENST00000435988 1254 ntBASIC21.98■■□□□ 1.11
BEST1O76090 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.98■■□□□ 1.11
BEST1O76090 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
BEST1O76090 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
BEST1O76090 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
BEST1O76090 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
BEST1O76090 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
BEST1O76090 AL024507.2-201ENST00000606070 2574 ntBASIC21.97■■□□□ 1.11
BEST1O76090 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
BEST1O76090 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.97■■□□□ 1.11
BEST1O76090 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
BEST1O76090 ID1-201ENST00000376105 1233 ntBASIC21.97■■□□□ 1.11
BEST1O76090 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
BEST1O76090 HLA-L-209ENST00000420110 1011 ntBASIC21.97■■□□□ 1.11
BEST1O76090 AC245052.3-201ENST00000450182 901 ntBASIC21.97■■□□□ 1.11
BEST1O76090 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
BEST1O76090 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.97■■□□□ 1.11
BEST1O76090 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
BEST1O76090 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BEST1O76090 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BEST1O76090 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
BEST1O76090 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
BEST1O76090 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
BEST1O76090 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
BEST1O76090 CYP2T1P-201ENST00000432607 1285 ntBASIC21.96■■□□□ 1.11
BEST1O76090 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
BEST1O76090 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.96■■□□□ 1.11
BEST1O76090 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.96■■□□□ 1.11
BEST1O76090 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
BEST1O76090 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.96■■□□□ 1.11
BEST1O76090 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.96■■□□□ 1.11
BEST1O76090 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.96■■□□□ 1.11
BEST1O76090 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
BEST1O76090 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.95■■□□□ 1.11
BEST1O76090 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.95■■□□□ 1.11
BEST1O76090 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
BEST1O76090 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
BEST1O76090 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
BEST1O76090 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.95■■□□□ 1.1
BEST1O76090 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.95■■□□□ 1.1
BEST1O76090 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.95■■□□□ 1.1
BEST1O76090 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
BEST1O76090 AC016405.3-201ENST00000607710 860 ntBASIC21.95■■□□□ 1.1
BEST1O76090 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BEST1O76090 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
BEST1O76090 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BEST1O76090 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.95■■□□□ 1.1
BEST1O76090 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
BEST1O76090 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BEST1O76090 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
BEST1O76090 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.95■■□□□ 1.1
BEST1O76090 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BEST1O76090 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BEST1O76090 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BEST1O76090 AC026310.3-201ENST00000625186 2373 ntBASIC21.94■■□□□ 1.1
BEST1O76090 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
BEST1O76090 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BEST1O76090 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BEST1O76090 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.94■■□□□ 1.1
BEST1O76090 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
BEST1O76090 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.94■■□□□ 1.1
BEST1O76090 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.94■■□□□ 1.1
BEST1O76090 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BEST1O76090 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.94■■□□□ 1.1
BEST1O76090 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
BEST1O76090 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BEST1O76090 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BEST1O76090 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BEST1O76090 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
BEST1O76090 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
BEST1O76090 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.93■■□□□ 1.1
BEST1O76090 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
BEST1O76090 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.93■■□□□ 1.1
BEST1O76090 AC083906.2-201ENST00000511578 360 ntBASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms