Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CPNE3O75131 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE3O75131 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.96■□□□□ 0.79
CPNE3O75131 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE3O75131 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE3O75131 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.96■□□□□ 0.79
CPNE3O75131 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE3O75131 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE3O75131 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CPNE3O75131 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE3O75131 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.96■□□□□ 0.79
CPNE3O75131 AL138781.1-201ENST00000566567 1274 ntBASIC19.96■□□□□ 0.79
CPNE3O75131 AC069236.1-201ENST00000604339 616 ntBASIC19.96■□□□□ 0.79
CPNE3O75131 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE3O75131 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE3O75131 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE3O75131 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.95■□□□□ 0.79
CPNE3O75131 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.95■□□□□ 0.78
CPNE3O75131 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE3O75131 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE3O75131 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CPNE3O75131 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE3O75131 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE3O75131 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE3O75131 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE3O75131 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CPNE3O75131 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE3O75131 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE3O75131 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CPNE3O75131 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE3O75131 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CPNE3O75131 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CPNE3O75131 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.95■□□□□ 0.78
CPNE3O75131 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.95■□□□□ 0.78
CPNE3O75131 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.95■□□□□ 0.78
CPNE3O75131 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE3O75131 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE3O75131 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE3O75131 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE3O75131 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE3O75131 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE3O75131 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CPNE3O75131 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE3O75131 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE3O75131 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE3O75131 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.94■□□□□ 0.78
CPNE3O75131 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE3O75131 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.94■□□□□ 0.78
CPNE3O75131 AC080038.3-201ENST00000623346 1952 ntBASIC19.94■□□□□ 0.78
CPNE3O75131 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE3O75131 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE3O75131 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.94■□□□□ 0.78
CPNE3O75131 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.94■□□□□ 0.78
CPNE3O75131 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE3O75131 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.94■□□□□ 0.78
CPNE3O75131 OR10C1-204ENST00000622521 1039 ntBASIC19.94■□□□□ 0.78
CPNE3O75131 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE3O75131 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE3O75131 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE3O75131 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.94■□□□□ 0.78
CPNE3O75131 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.94■□□□□ 0.78
CPNE3O75131 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE3O75131 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE3O75131 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE3O75131 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE3O75131 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE3O75131 AC069152.1-201ENST00000438030 544 ntBASIC19.93■□□□□ 0.78
CPNE3O75131 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.93■□□□□ 0.78
CPNE3O75131 CD99P1-205ENST00000527459 561 ntBASIC19.93■□□□□ 0.78
CPNE3O75131 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.93■□□□□ 0.78
CPNE3O75131 AC133041.1-202ENST00000642053 222 ntBASIC19.93■□□□□ 0.78
CPNE3O75131 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE3O75131 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE3O75131 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE3O75131 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE3O75131 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE3O75131 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE3O75131 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
CPNE3O75131 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.93■□□□□ 0.78
CPNE3O75131 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE3O75131 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE3O75131 AC061975.6-201ENST00000579045 1553 ntBASIC19.92■□□□□ 0.78
CPNE3O75131 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.92■□□□□ 0.78
CPNE3O75131 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.92■□□□□ 0.78
CPNE3O75131 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE3O75131 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CPNE3O75131 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CPNE3O75131 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.92■□□□□ 0.78
CPNE3O75131 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.92■□□□□ 0.78
CPNE3O75131 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.92■□□□□ 0.78
CPNE3O75131 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE3O75131 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CPNE3O75131 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE3O75131 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE3O75131 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE3O75131 RBM17P2-201ENST00000616397 1405 ntBASIC19.92■□□□□ 0.78
CPNE3O75131 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CPNE3O75131 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE3O75131 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE3O75131 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms