Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRAMEF2O60811 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.58■□□□□ 0.73
PRAMEF2O60811 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRAMEF2O60811 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PRAMEF2O60811 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEF2O60811 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEF2O60811 NCF1B-203ENST00000435988 1254 ntBASIC19.58■□□□□ 0.72
PRAMEF2O60811 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.58■□□□□ 0.72
PRAMEF2O60811 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.58■□□□□ 0.72
PRAMEF2O60811 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.58■□□□□ 0.72
PRAMEF2O60811 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.58■□□□□ 0.72
PRAMEF2O60811 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.58■□□□□ 0.72
PRAMEF2O60811 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEF2O60811 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.58■□□□□ 0.72
PRAMEF2O60811 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEF2O60811 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PRAMEF2O60811 AL109923.1-201ENST00000618799 583 ntBASIC19.58■□□□□ 0.72
PRAMEF2O60811 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEF2O60811 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEF2O60811 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.58■□□□□ 0.72
PRAMEF2O60811 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEF2O60811 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEF2O60811 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF2O60811 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF2O60811 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PRAMEF2O60811 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF2O60811 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF2O60811 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF2O60811 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.57■□□□□ 0.72
PRAMEF2O60811 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF2O60811 POU5F1P4-201ENST00000413175 1085 ntBASIC19.57■□□□□ 0.72
PRAMEF2O60811 AC010141.2-201ENST00000452426 721 ntBASIC19.57■□□□□ 0.72
PRAMEF2O60811 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF2O60811 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.57■□□□□ 0.72
PRAMEF2O60811 AC231657.2-201ENST00000624556 255 ntBASIC19.57■□□□□ 0.72
PRAMEF2O60811 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF2O60811 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF2O60811 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF2O60811 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.57■□□□□ 0.72
PRAMEF2O60811 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF2O60811 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF2O60811 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.56■□□□□ 0.72
PRAMEF2O60811 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.56■□□□□ 0.72
PRAMEF2O60811 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PRAMEF2O60811 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF2O60811 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PRAMEF2O60811 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF2O60811 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF2O60811 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF2O60811 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.56■□□□□ 0.72
PRAMEF2O60811 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF2O60811 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PRAMEF2O60811 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PRAMEF2O60811 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.56■□□□□ 0.72
PRAMEF2O60811 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.56■□□□□ 0.72
PRAMEF2O60811 MYCNOS-205ENST00000641950 531 ntBASIC19.56■□□□□ 0.72
PRAMEF2O60811 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF2O60811 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF2O60811 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF2O60811 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.56■□□□□ 0.72
PRAMEF2O60811 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PRAMEF2O60811 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.55■□□□□ 0.72
PRAMEF2O60811 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF2O60811 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF2O60811 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PRAMEF2O60811 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PRAMEF2O60811 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PRAMEF2O60811 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.55■□□□□ 0.72
PRAMEF2O60811 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.55■□□□□ 0.72
PRAMEF2O60811 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.55■□□□□ 0.72
PRAMEF2O60811 AC120498.10-201ENST00000621827 505 ntBASIC19.55■□□□□ 0.72
PRAMEF2O60811 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF2O60811 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF2O60811 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF2O60811 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.54■□□□□ 0.72
PRAMEF2O60811 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF2O60811 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.54■□□□□ 0.72
PRAMEF2O60811 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF2O60811 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.54■□□□□ 0.72
PRAMEF2O60811 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF2O60811 GPX1P1-201ENST00000388829 606 ntBASIC19.54■□□□□ 0.72
PRAMEF2O60811 AL355802.2-201ENST00000402069 882 ntBASIC19.54■□□□□ 0.72
PRAMEF2O60811 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.54■□□□□ 0.72
PRAMEF2O60811 AC007322.1-201ENST00000426983 750 ntBASIC19.54■□□□□ 0.72
PRAMEF2O60811 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF2O60811 DUX4L16-201ENST00000555130 1264 ntBASIC19.54■□□□□ 0.72
PRAMEF2O60811 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.54■□□□□ 0.72
PRAMEF2O60811 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PRAMEF2O60811 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.54■□□□□ 0.72
PRAMEF2O60811 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.54■□□□□ 0.72
PRAMEF2O60811 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF2O60811 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF2O60811 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PRAMEF2O60811 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF2O60811 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF2O60811 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF2O60811 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PRAMEF2O60811 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF2O60811 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF2O60811 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms