Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.97■□□□□ 0.79
LCMT2O60294 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LCMT2O60294 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LCMT2O60294 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LCMT2O60294 AL049796.1-201ENST00000565336 1766 ntBASIC19.97■□□□□ 0.79
LCMT2O60294 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LCMT2O60294 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LCMT2O60294 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
LCMT2O60294 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.97■□□□□ 0.79
LCMT2O60294 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LCMT2O60294 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LCMT2O60294 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LCMT2O60294 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LCMT2O60294 KRT18P11-201ENST00000435214 1283 ntBASIC19.96■□□□□ 0.79
LCMT2O60294 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.96■□□□□ 0.79
LCMT2O60294 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LCMT2O60294 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.96■□□□□ 0.79
LCMT2O60294 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.96■□□□□ 0.79
LCMT2O60294 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.96■□□□□ 0.79
LCMT2O60294 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LCMT2O60294 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LCMT2O60294 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.96■□□□□ 0.79
LCMT2O60294 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LCMT2O60294 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LCMT2O60294 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LCMT2O60294 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LCMT2O60294 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
LCMT2O60294 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LCMT2O60294 AC092666.2-201ENST00000613287 246 ntBASIC19.95■□□□□ 0.78
LCMT2O60294 AC011767.1-201ENST00000617410 1153 ntBASIC19.95■□□□□ 0.78
LCMT2O60294 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
LCMT2O60294 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LCMT2O60294 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LCMT2O60294 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.95■□□□□ 0.78
LCMT2O60294 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LCMT2O60294 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LCMT2O60294 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.94■□□□□ 0.78
LCMT2O60294 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
LCMT2O60294 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.94■□□□□ 0.78
LCMT2O60294 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LCMT2O60294 AC004911.1-201ENST00000416316 871 ntBASIC19.94■□□□□ 0.78
LCMT2O60294 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LCMT2O60294 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
LCMT2O60294 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LCMT2O60294 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LCMT2O60294 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.94■□□□□ 0.78
LCMT2O60294 MFSD11-216ENST00000590393 1141 ntBASIC19.94■□□□□ 0.78
LCMT2O60294 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.94■□□□□ 0.78
LCMT2O60294 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.94■□□□□ 0.78
LCMT2O60294 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LCMT2O60294 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LCMT2O60294 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
LCMT2O60294 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LCMT2O60294 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LCMT2O60294 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.93■□□□□ 0.78
LCMT2O60294 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
LCMT2O60294 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LCMT2O60294 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.93■□□□□ 0.78
LCMT2O60294 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LCMT2O60294 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.93■□□□□ 0.78
LCMT2O60294 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LCMT2O60294 RBM17P2-201ENST00000616397 1405 ntBASIC19.93■□□□□ 0.78
LCMT2O60294 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LCMT2O60294 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LCMT2O60294 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LCMT2O60294 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.92■□□□□ 0.78
LCMT2O60294 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LCMT2O60294 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LCMT2O60294 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.92■□□□□ 0.78
LCMT2O60294 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.92■□□□□ 0.78
LCMT2O60294 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.92■□□□□ 0.78
LCMT2O60294 AL137784.2-201ENST00000607332 1000 ntBASIC19.92■□□□□ 0.78
LCMT2O60294 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LCMT2O60294 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
LCMT2O60294 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.92■□□□□ 0.78
LCMT2O60294 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.92■□□□□ 0.78
LCMT2O60294 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.92■□□□□ 0.78
LCMT2O60294 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
LCMT2O60294 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LCMT2O60294 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.92■□□□□ 0.78
LCMT2O60294 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LCMT2O60294 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LCMT2O60294 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LCMT2O60294 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LCMT2O60294 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LCMT2O60294 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LCMT2O60294 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LCMT2O60294 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LCMT2O60294 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.91■□□□□ 0.78
LCMT2O60294 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.91■□□□□ 0.78
LCMT2O60294 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.91■□□□□ 0.78
LCMT2O60294 DUX4L16-201ENST00000555130 1264 ntBASIC19.91■□□□□ 0.78
LCMT2O60294 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.91■□□□□ 0.78
LCMT2O60294 BID-214ENST00000617586 542 ntTSL 5 BASIC19.91■□□□□ 0.78
LCMT2O60294 AC010536.3-201ENST00000620306 533 ntBASIC19.91■□□□□ 0.78
LCMT2O60294 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.91■□□□□ 0.78
LCMT2O60294 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LCMT2O60294 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LCMT2O60294 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LCMT2O60294 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms