Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CHD2O14647 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC29.44■■■□□ 2.3
CHD2O14647 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC29.43■■■□□ 2.3
CHD2O14647 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CHD2O14647 CRK-204ENST00000574295 1391 ntTSL 5 BASIC29.43■■■□□ 2.3
CHD2O14647 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CHD2O14647 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC29.43■■■□□ 2.3
CHD2O14647 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC29.43■■■□□ 2.3
CHD2O14647 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
CHD2O14647 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CHD2O14647 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
CHD2O14647 AC133561.5-201ENST00000635547 218 ntBASIC29.42■■■□□ 2.3
CHD2O14647 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC29.42■■■□□ 2.3
CHD2O14647 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CHD2O14647 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC29.41■■■□□ 2.3
CHD2O14647 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC29.41■■■□□ 2.3
CHD2O14647 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC29.41■■■□□ 2.3
CHD2O14647 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CHD2O14647 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
CHD2O14647 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC29.41■■■□□ 2.3
CHD2O14647 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CHD2O14647 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CHD2O14647 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CHD2O14647 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
CHD2O14647 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC29.41■■■□□ 2.3
CHD2O14647 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CHD2O14647 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC29.41■■■□□ 2.3
CHD2O14647 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CHD2O14647 HES2-205ENST00000487437 968 ntTSL 3 BASIC29.41■■■□□ 2.3
CHD2O14647 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC29.41■■■□□ 2.3
CHD2O14647 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC29.41■■■□□ 2.3
CHD2O14647 AC113410.3-201ENST00000623366 203 ntBASIC29.41■■■□□ 2.3
CHD2O14647 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC29.4■■■□□ 2.3
CHD2O14647 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC29.4■■■□□ 2.3
CHD2O14647 KRT18P68-201ENST00000392293 1000 ntBASIC29.4■■■□□ 2.3
CHD2O14647 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
CHD2O14647 RN7SL850P-201ENST00000579959 291 ntBASIC29.4■■■□□ 2.3
CHD2O14647 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CHD2O14647 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
CHD2O14647 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC29.4■■■□□ 2.3
CHD2O14647 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CHD2O14647 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
CHD2O14647 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC29.39■■■□□ 2.3
CHD2O14647 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CHD2O14647 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC29.39■■■□□ 2.3
CHD2O14647 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CHD2O14647 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CHD2O14647 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
CHD2O14647 MFF-205ENST00000354503 1085 ntTSL 2 BASIC29.39■■■□□ 2.3
CHD2O14647 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC29.39■■■□□ 2.3
CHD2O14647 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC29.39■■■□□ 2.3
CHD2O14647 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CHD2O14647 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC29.39■■■□□ 2.3
CHD2O14647 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC29.39■■■□□ 2.3
CHD2O14647 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CHD2O14647 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC29.39■■■□□ 2.3
CHD2O14647 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC29.39■■■□□ 2.29
CHD2O14647 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
CHD2O14647 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
CHD2O14647 KRT17P2-201ENST00000300992 1314 ntBASIC29.38■■■□□ 2.29
CHD2O14647 TSPY15P-201ENST00000457163 923 ntBASIC29.38■■■□□ 2.29
CHD2O14647 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
CHD2O14647 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
CHD2O14647 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CHD2O14647 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CHD2O14647 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CHD2O14647 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
CHD2O14647 MIR4785-201ENST00000585005 73 ntBASIC29.38■■■□□ 2.29
CHD2O14647 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CHD2O14647 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CHD2O14647 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
CHD2O14647 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
CHD2O14647 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC29.37■■■□□ 2.29
CHD2O14647 TK2-213ENST00000563369 882 ntTSL 5 BASIC29.37■■■□□ 2.29
CHD2O14647 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC29.37■■■□□ 2.29
CHD2O14647 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC29.37■■■□□ 2.29
CHD2O14647 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
CHD2O14647 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
CHD2O14647 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
CHD2O14647 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
CHD2O14647 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CHD2O14647 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CHD2O14647 CYP21A1P-202ENST00000354927 1481 ntBASIC29.36■■■□□ 2.29
CHD2O14647 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC29.36■■■□□ 2.29
CHD2O14647 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CHD2O14647 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC29.36■■■□□ 2.29
CHD2O14647 AC239809.2-201ENST00000415381 517 ntBASIC29.36■■■□□ 2.29
CHD2O14647 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC29.36■■■□□ 2.29
CHD2O14647 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC29.36■■■□□ 2.29
CHD2O14647 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CHD2O14647 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC29.36■■■□□ 2.29
CHD2O14647 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CHD2O14647 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CHD2O14647 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CHD2O14647 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CHD2O14647 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC29.35■■■□□ 2.29
CHD2O14647 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CHD2O14647 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC29.35■■■□□ 2.29
CHD2O14647 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
CHD2O14647 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms