Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.66■□□□□ 0.74
CLDN4O14493 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.66■□□□□ 0.74
CLDN4O14493 AC011767.1-201ENST00000617410 1153 ntBASIC19.66■□□□□ 0.74
CLDN4O14493 AC092437.1-201ENST00000624794 1048 ntBASIC19.66■□□□□ 0.74
CLDN4O14493 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.66■□□□□ 0.74
CLDN4O14493 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CLDN4O14493 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN4O14493 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLDN4O14493 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CLDN4O14493 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.66■□□□□ 0.74
CLDN4O14493 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.66■□□□□ 0.74
CLDN4O14493 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN4O14493 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN4O14493 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN4O14493 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN4O14493 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN4O14493 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN4O14493 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN4O14493 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN4O14493 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
CLDN4O14493 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.65■□□□□ 0.74
CLDN4O14493 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN4O14493 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN4O14493 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN4O14493 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN4O14493 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN4O14493 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN4O14493 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CLDN4O14493 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN4O14493 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.64■□□□□ 0.74
CLDN4O14493 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLDN4O14493 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CLDN4O14493 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN4O14493 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN4O14493 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN4O14493 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN4O14493 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN4O14493 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN4O14493 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CLDN4O14493 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.64■□□□□ 0.73
CLDN4O14493 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CLDN4O14493 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.64■□□□□ 0.73
CLDN4O14493 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.64■□□□□ 0.73
CLDN4O14493 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN4O14493 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN4O14493 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.64■□□□□ 0.73
CLDN4O14493 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CLDN4O14493 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN4O14493 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN4O14493 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN4O14493 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN4O14493 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN4O14493 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
CLDN4O14493 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN4O14493 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.63■□□□□ 0.73
CLDN4O14493 MFSD11-216ENST00000590393 1141 ntBASIC19.63■□□□□ 0.73
CLDN4O14493 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN4O14493 AC010536.3-201ENST00000620306 533 ntBASIC19.63■□□□□ 0.73
CLDN4O14493 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CLDN4O14493 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN4O14493 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.62■□□□□ 0.73
CLDN4O14493 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN4O14493 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN4O14493 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN4O14493 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CLDN4O14493 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN4O14493 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CLDN4O14493 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN4O14493 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.62■□□□□ 0.73
CLDN4O14493 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.62■□□□□ 0.73
CLDN4O14493 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.62■□□□□ 0.73
CLDN4O14493 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.62■□□□□ 0.73
CLDN4O14493 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.62■□□□□ 0.73
CLDN4O14493 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
CLDN4O14493 AC243732.1-201ENST00000612648 864 ntBASIC19.62■□□□□ 0.73
CLDN4O14493 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN4O14493 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.62■□□□□ 0.73
CLDN4O14493 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN4O14493 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN4O14493 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.61■□□□□ 0.73
CLDN4O14493 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN4O14493 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN4O14493 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CLDN4O14493 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN4O14493 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN4O14493 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN4O14493 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN4O14493 TERF1P5-201ENST00000477545 1207 ntBASIC19.61■□□□□ 0.73
CLDN4O14493 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.61■□□□□ 0.73
CLDN4O14493 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN4O14493 AC080038.1-201ENST00000611274 1154 ntBASIC19.61■□□□□ 0.73
CLDN4O14493 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CLDN4O14493 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN4O14493 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN4O14493 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN4O14493 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN4O14493 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN4O14493 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN4O14493 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN4O14493 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms