Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDC7O00311 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDC7O00311 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC7O00311 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CDC7O00311 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.44■□□□□ 0.86
CDC7O00311 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC7O00311 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.44■□□□□ 0.86
CDC7O00311 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC7O00311 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC7O00311 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC7O00311 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
CDC7O00311 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDC7O00311 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC7O00311 AC121338.2-201ENST00000622535 1744 ntBASIC20.44■□□□□ 0.86
CDC7O00311 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC7O00311 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC7O00311 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CDC7O00311 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.43■□□□□ 0.86
CDC7O00311 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDC7O00311 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.43■□□□□ 0.86
CDC7O00311 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDC7O00311 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CDC7O00311 AC123595.1-201ENST00000440769 1046 ntBASIC20.43■□□□□ 0.86
CDC7O00311 YBX1P1-201ENST00000445822 960 ntBASIC20.43■□□□□ 0.86
CDC7O00311 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC7O00311 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.43■□□□□ 0.86
CDC7O00311 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.43■□□□□ 0.86
CDC7O00311 TERF1P2-201ENST00000583350 1212 ntBASIC20.43■□□□□ 0.86
CDC7O00311 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.43■□□□□ 0.86
CDC7O00311 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.43■□□□□ 0.86
CDC7O00311 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CDC7O00311 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC7O00311 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
CDC7O00311 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CDC7O00311 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDC7O00311 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CDC7O00311 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC7O00311 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CDC7O00311 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC7O00311 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.42■□□□□ 0.86
CDC7O00311 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.42■□□□□ 0.86
CDC7O00311 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC7O00311 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.42■□□□□ 0.86
CDC7O00311 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC7O00311 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.42■□□□□ 0.86
CDC7O00311 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.42■□□□□ 0.86
CDC7O00311 AC138907.5-202ENST00000569484 235 ntBASIC20.42■□□□□ 0.86
CDC7O00311 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.42■□□□□ 0.86
CDC7O00311 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDC7O00311 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDC7O00311 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDC7O00311 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CDC7O00311 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.42■□□□□ 0.86
CDC7O00311 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.42■□□□□ 0.86
CDC7O00311 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC7O00311 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC7O00311 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CDC7O00311 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDC7O00311 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.41■□□□□ 0.86
CDC7O00311 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC7O00311 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.41■□□□□ 0.86
CDC7O00311 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC7O00311 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC7O00311 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC7O00311 CCDC92B-201ENST00000575506 885 ntBASIC20.41■□□□□ 0.86
CDC7O00311 AC104187.1-201ENST00000607510 612 ntBASIC20.41■□□□□ 0.86
CDC7O00311 AC008175.2-201ENST00000612840 297 ntBASIC20.41■□□□□ 0.86
CDC7O00311 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDC7O00311 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC7O00311 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC7O00311 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC7O00311 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC7O00311 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.41■□□□□ 0.86
CDC7O00311 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.41■□□□□ 0.86
CDC7O00311 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CDC7O00311 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC7O00311 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.41■□□□□ 0.86
CDC7O00311 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC7O00311 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.41■□□□□ 0.86
CDC7O00311 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.41■□□□□ 0.86
CDC7O00311 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
CDC7O00311 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC7O00311 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC7O00311 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDC7O00311 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CDC7O00311 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.4■□□□□ 0.86
CDC7O00311 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.4■□□□□ 0.86
CDC7O00311 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC7O00311 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.4■□□□□ 0.86
CDC7O00311 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CDC7O00311 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.4■□□□□ 0.86
CDC7O00311 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC7O00311 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC7O00311 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDC7O00311 POU5F1P4-201ENST00000413175 1085 ntBASIC20.4■□□□□ 0.86
CDC7O00311 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC7O00311 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.4■□□□□ 0.86
CDC7O00311 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.4■□□□□ 0.86
CDC7O00311 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC7O00311 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms