Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
AP4M1O00189 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP4M1O00189 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.09■□□□□ 0.33
AP4M1O00189 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP4M1O00189 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP4M1O00189 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP4M1O00189 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
AP4M1O00189 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
AP4M1O00189 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
AP4M1O00189 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP4M1O00189 RARRES2P6-201ENST00000567333 442 ntBASIC17.09■□□□□ 0.33
AP4M1O00189 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.09■□□□□ 0.33
AP4M1O00189 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP4M1O00189 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.09■□□□□ 0.33
AP4M1O00189 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP4M1O00189 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
AP4M1O00189 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP4M1O00189 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP4M1O00189 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP4M1O00189 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.09■□□□□ 0.33
AP4M1O00189 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP4M1O00189 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP4M1O00189 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP4M1O00189 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
AP4M1O00189 AC087289.5-201ENST00000586076 3175 ntBASIC17.09■□□□□ 0.33
AP4M1O00189 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
AP4M1O00189 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
AP4M1O00189 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP4M1O00189 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP4M1O00189 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.08■□□□□ 0.32
AP4M1O00189 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP4M1O00189 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP4M1O00189 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP4M1O00189 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP4M1O00189 YBX1P1-201ENST00000445822 960 ntBASIC17.08■□□□□ 0.32
AP4M1O00189 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.08■□□□□ 0.32
AP4M1O00189 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.08■□□□□ 0.32
AP4M1O00189 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.08■□□□□ 0.32
AP4M1O00189 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
AP4M1O00189 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.08■□□□□ 0.32
AP4M1O00189 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP4M1O00189 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP4M1O00189 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP4M1O00189 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4M1O00189 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.07■□□□□ 0.32
AP4M1O00189 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
AP4M1O00189 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4M1O00189 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.07■□□□□ 0.32
AP4M1O00189 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4M1O00189 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP4M1O00189 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4M1O00189 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4M1O00189 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4M1O00189 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.07■□□□□ 0.32
AP4M1O00189 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4M1O00189 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4M1O00189 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4M1O00189 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.07■□□□□ 0.32
AP4M1O00189 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.07■□□□□ 0.32
AP4M1O00189 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.07■□□□□ 0.32
AP4M1O00189 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
AP4M1O00189 SMUG1P1-201ENST00000590640 811 ntBASIC17.07■□□□□ 0.32
AP4M1O00189 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.07■□□□□ 0.32
AP4M1O00189 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.07■□□□□ 0.32
AP4M1O00189 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.07■□□□□ 0.32
AP4M1O00189 MIR6084-201ENST00000622012 110 ntBASIC17.07■□□□□ 0.32
AP4M1O00189 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4M1O00189 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4M1O00189 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4M1O00189 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP4M1O00189 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP4M1O00189 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
AP4M1O00189 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
AP4M1O00189 AC026471.1-201ENST00000564629 3026 ntBASIC17.07■□□□□ 0.32
AP4M1O00189 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.06■□□□□ 0.32
AP4M1O00189 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP4M1O00189 FAM99A-202ENST00000538190 1989 ntBASIC17.06■□□□□ 0.32
AP4M1O00189 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.06■□□□□ 0.32
AP4M1O00189 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP4M1O00189 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.06■□□□□ 0.32
AP4M1O00189 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP4M1O00189 AC097381.1-201ENST00000429019 1296 ntBASIC17.06■□□□□ 0.32
AP4M1O00189 AC123595.1-201ENST00000440769 1046 ntBASIC17.06■□□□□ 0.32
AP4M1O00189 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.06■□□□□ 0.32
AP4M1O00189 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP4M1O00189 MIR6821-201ENST00000617625 74 ntBASIC17.06■□□□□ 0.32
AP4M1O00189 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
AP4M1O00189 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
AP4M1O00189 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP4M1O00189 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP4M1O00189 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AP4M1O00189 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.06■□□□□ 0.32
AP4M1O00189 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
AP4M1O00189 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.06■□□□□ 0.32
AP4M1O00189 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP4M1O00189 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP4M1O00189 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP4M1O00189 OR7E47P-201ENST00000546390 1422 ntBASIC17.05■□□□□ 0.32
AP4M1O00189 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.05■□□□□ 0.32
AP4M1O00189 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms