Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
DDX39AO00148 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.5■■□□□ 1.35
DDX39AO00148 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
DDX39AO00148 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX39AO00148 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.5■■□□□ 1.35
DDX39AO00148 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX39AO00148 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.5■■□□□ 1.35
DDX39AO00148 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
DDX39AO00148 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.5■■□□□ 1.35
DDX39AO00148 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX39AO00148 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX39AO00148 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.49■■□□□ 1.35
DDX39AO00148 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX39AO00148 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX39AO00148 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
DDX39AO00148 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX39AO00148 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX39AO00148 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX39AO00148 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.49■■□□□ 1.35
DDX39AO00148 AC245052.3-201ENST00000450182 901 ntBASIC23.49■■□□□ 1.35
DDX39AO00148 AF201337.1-201ENST00000520239 748 ntBASIC23.49■■□□□ 1.35
DDX39AO00148 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
DDX39AO00148 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.49■■□□□ 1.35
DDX39AO00148 AC016405.3-201ENST00000607710 860 ntBASIC23.49■■□□□ 1.35
DDX39AO00148 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.49■■□□□ 1.35
DDX39AO00148 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
DDX39AO00148 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
DDX39AO00148 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
DDX39AO00148 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
DDX39AO00148 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
DDX39AO00148 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
DDX39AO00148 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
DDX39AO00148 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
DDX39AO00148 GUSBP6-202ENST00000438529 1198 ntBASIC23.48■■□□□ 1.35
DDX39AO00148 TSPY6P-201ENST00000448518 926 ntBASIC23.48■■□□□ 1.35
DDX39AO00148 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
DDX39AO00148 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.48■■□□□ 1.35
DDX39AO00148 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.48■■□□□ 1.35
DDX39AO00148 AC243732.1-201ENST00000612648 864 ntBASIC23.48■■□□□ 1.35
DDX39AO00148 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.48■■□□□ 1.35
DDX39AO00148 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
DDX39AO00148 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.48■■□□□ 1.35
DDX39AO00148 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.48■■□□□ 1.35
DDX39AO00148 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
DDX39AO00148 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
DDX39AO00148 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
DDX39AO00148 AC093787.1-201ENST00000450396 207 ntBASIC23.47■■□□□ 1.35
DDX39AO00148 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.47■■□□□ 1.35
DDX39AO00148 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.47■■□□□ 1.35
DDX39AO00148 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.47■■□□□ 1.35
DDX39AO00148 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX39AO00148 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
DDX39AO00148 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX39AO00148 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX39AO00148 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX39AO00148 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX39AO00148 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX39AO00148 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX39AO00148 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX39AO00148 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX39AO00148 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX39AO00148 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX39AO00148 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.46■■□□□ 1.35
DDX39AO00148 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX39AO00148 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX39AO00148 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
DDX39AO00148 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
DDX39AO00148 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX39AO00148 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.46■■□□□ 1.35
DDX39AO00148 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
DDX39AO00148 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
DDX39AO00148 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.46■■□□□ 1.35
DDX39AO00148 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
DDX39AO00148 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX39AO00148 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.46■■□□□ 1.35
DDX39AO00148 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
DDX39AO00148 AL591742.1-201ENST00000604433 565 ntBASIC23.46■■□□□ 1.35
DDX39AO00148 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.46■■□□□ 1.35
DDX39AO00148 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.46■■□□□ 1.35
DDX39AO00148 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.46■■□□□ 1.35
DDX39AO00148 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX39AO00148 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
DDX39AO00148 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.45■■□□□ 1.34
DDX39AO00148 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
DDX39AO00148 AC091799.1-201ENST00000422823 811 ntBASIC23.45■■□□□ 1.34
DDX39AO00148 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
DDX39AO00148 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.45■■□□□ 1.34
DDX39AO00148 AL138781.1-201ENST00000566567 1274 ntBASIC23.45■■□□□ 1.34
DDX39AO00148 AC133552.2-202ENST00000575694 574 ntBASIC23.45■■□□□ 1.34
DDX39AO00148 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
DDX39AO00148 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.45■■□□□ 1.34
DDX39AO00148 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.45■■□□□ 1.34
DDX39AO00148 AC244015.2-201ENST00000616358 1861 ntBASIC23.45■■□□□ 1.34
DDX39AO00148 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.45■■□□□ 1.34
DDX39AO00148 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
DDX39AO00148 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
DDX39AO00148 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
DDX39AO00148 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
DDX39AO00148 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
DDX39AO00148 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms