Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 SMG8-203ENST00000578922 2178 ntBASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-1A0A0K0K1D8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRBV6-1A0A0K0K1D8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRBV6-1A0A0K0K1D8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-1A0A0K0K1D8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.58■□□□□ 0.08
TRBV6-1A0A0K0K1D8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.58■□□□□ 0.08
TRBV6-1A0A0K0K1D8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-1A0A0K0K1D8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.58■□□□□ 0.08
TRBV6-1A0A0K0K1D8 FP700111.2-201ENST00000619190 1892 ntBASIC15.58■□□□□ 0.08
TRBV6-1A0A0K0K1D8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-1A0A0K0K1D8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-1A0A0K0K1D8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.58■□□□□ 0.08
TRBV6-1A0A0K0K1D8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-1A0A0K0K1D8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-1A0A0K0K1D8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 AC011484.1-201ENST00000377652 1995 ntBASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 BX005040.4-201ENST00000637145 1518 ntBASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-1A0A0K0K1D8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 AL391422.3-201ENST00000603791 2761 ntBASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 UNC93B8-201ENST00000511903 705 ntBASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRBV6-1A0A0K0K1D8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRBV6-1A0A0K0K1D8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-1A0A0K0K1D8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms