Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAV22A0A0B4J277 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
TRAV22A0A0B4J277 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
TRAV22A0A0B4J277 ME2-216ENST00000639850 2331 ntTSL 5 BASIC11.83□□□□□ -0.51
TRAV22A0A0B4J277 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 DUX4L11-201ENST00000611504 1267 ntBASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 DUX4L12-201ENST00000614593 1267 ntBASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 DUX4L14-201ENST00000621227 1267 ntBASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRAV22A0A0B4J277 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 AC004408.2-201ENST00000623613 2777 ntBASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
TRAV22A0A0B4J277 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC11.81□□□□□ -0.52
TRAV22A0A0B4J277 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms