Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC093142.1-201ENST00000436725 349 ntBASIC10.8□□□□□ -0.68
LMO3Q8TAP4 AC079355.2-201ENST00000440057 190 ntBASIC10.8□□□□□ -0.68
LMO3Q8TAP4 RUSC1-AS1-201ENST00000443642 679 ntTSL 5 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 GAPDHP52-201ENST00000449535 942 ntBASIC10.8□□□□□ -0.68
LMO3Q8TAP4 AL662890.2-201ENST00000457253 709 ntTSL 3 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 SCARNA7-201ENST00000458797 330 ntBASIC10.8□□□□□ -0.68
LMO3Q8TAP4 RN7SL415P-201ENST00000490790 289 ntBASIC10.8□□□□□ -0.68
LMO3Q8TAP4 COX7C-207ENST00000515763 347 ntAPPRIS ALT1 TSL 4 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 MYCT1-202ENST00000529453 724 ntTSL 3 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 AL121988.1-201ENST00000542839 560 ntTSL 5 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 HNRNPA3P10-201ENST00000547726 1138 ntBASIC10.8□□□□□ -0.68
LMO3Q8TAP4 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 RN7SL693P-201ENST00000579576 279 ntBASIC10.8□□□□□ -0.68
LMO3Q8TAP4 AC011481.1-201ENST00000591646 361 ntTSL 3 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 HNRNPA3P16-201ENST00000591842 1016 ntBASIC10.8□□□□□ -0.68
LMO3Q8TAP4 AL137796.1-201ENST00000608190 577 ntBASIC10.8□□□□□ -0.68
LMO3Q8TAP4 AC124076.1-201ENST00000611470 608 ntBASIC10.8□□□□□ -0.68
LMO3Q8TAP4 MIR1273H-201ENST00000612921 116 ntBASIC10.8□□□□□ -0.68
LMO3Q8TAP4 CCL4L2-219ENST00000620732 856 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 AC132154.1-201ENST00000623248 2134 ntBASIC10.8□□□□□ -0.68
LMO3Q8TAP4 LINC01943-201ENST00000625410 559 ntTSL 2 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 CD9-201ENST00000009180 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 GREB1-202ENST00000263834 2448 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 HMGB3-201ENST00000325307 3560 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 AGK-203ENST00000473247 1550 ntTSL 5 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 DRAXIN-201ENST00000294485 7346 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 CATSPERG-204ENST00000410018 3626 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 ZMIZ2-203ENST00000413916 3773 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 SLC12A3-202ENST00000438926 5567 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 LINC00461-201ENST00000500197 3381 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 AC012456.1-201ENST00000430048 1605 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 HNRNPC-208ENST00000553753 1790 ntTSL 5 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 EOMES-203ENST00000461503 2080 ntTSL 2 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 FP700111.1-201ENST00000441760 2502 ntTSL 2 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 SEZ6L2-209ENST00000617533 3555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 MAPKBP1-201ENST00000456763 7158 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 CX3CL1-202ENST00000563383 3313 ntTSL 5 BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 CUL1-202ENST00000409469 2857 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 AC109779.1-203ENST00000411727 2100 ntTSL 2 BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 BUB1-201ENST00000302759 3507 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 AC012651.1-204ENST00000495723 3881 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 Z82186.1-201ENST00000434707 4364 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 AC008040.1-204ENST00000469301 1738 ntTSL 2 BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 BHLHB9-204ENST00000448867 3936 ntAPPRIS P1 TSL 4 BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 EPHA5-205ENST00000613740 8355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 SLC6A20-201ENST00000353278 5247 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 RNA5SP488-201ENST00000364942 116 ntBASIC10.79□□□□□ -0.68
LMO3Q8TAP4 AC064847.1-201ENST00000403125 506 ntBASIC10.79□□□□□ -0.68
LMO3Q8TAP4 MORN2-205ENST00000410014 750 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 HNRNPA1P66-201ENST00000416539 934 ntBASIC10.79□□□□□ -0.68
LMO3Q8TAP4 AP000344.1-203ENST00000426024 163 ntBASIC10.79□□□□□ -0.68
LMO3Q8TAP4 RPL36AP35-201ENST00000426082 308 ntBASIC10.79□□□□□ -0.68
LMO3Q8TAP4 AL591644.1-201ENST00000436102 764 ntBASIC10.79□□□□□ -0.68
LMO3Q8TAP4 AL132671.2-201ENST00000467125 930 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 IGHV1-67-201ENST00000519713 357 ntBASIC10.79□□□□□ -0.68
LMO3Q8TAP4 GPHA2-203ENST00000533257 582 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 AC134684.1-201ENST00000533883 264 ntBASIC10.79□□□□□ -0.68
LMO3Q8TAP4 AC078950.1-202ENST00000542062 562 ntTSL 4 BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 AL049870.2-201ENST00000554389 693 ntTSL 3 BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 PEX11A-203ENST00000559170 905 ntTSL 2 BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 LINC00564-201ENST00000567258 1119 ntBASIC10.79□□□□□ -0.68
LMO3Q8TAP4 LINC01982-201ENST00000572848 308 ntTSL 5 BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 RN7SL391P-201ENST00000582559 284 ntBASIC10.79□□□□□ -0.68
LMO3Q8TAP4 RN7SL411P-201ENST00000585204 300 ntBASIC10.79□□□□□ -0.68
LMO3Q8TAP4 AC011468.5-201ENST00000614138 748 ntBASIC10.79□□□□□ -0.68
LMO3Q8TAP4 AC005578.1-201ENST00000622962 1020 ntBASIC10.79□□□□□ -0.68
LMO3Q8TAP4 WARS-238ENST00000557135 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 TMEM52B-201ENST00000298530 2731 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 PPM1L-202ENST00000464260 2735 ntTSL 2 BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 NUP85-203ENST00000540768 1926 ntTSL 2 BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 SERPINA1-201ENST00000355814 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 ZNF433-201ENST00000344980 2280 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 COL17A1-203ENST00000393211 1610 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 ZDHHC11B-202ENST00000508859 1631 ntAPPRIS P5 TSL 5 BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 MYO10-210ENST00000513610 8038 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 ZAN-207ENST00000620596 8396 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 GMEB1-203ENST00000373816 6410 ntAPPRIS ALT1 TSL 2 BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 OR11A1-202ENST00000377148 2482 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 PSMC1P11-201ENST00000405257 1317 ntBASIC10.79□□□□□ -0.68
LMO3Q8TAP4 GGCX-205ENST00000430215 2314 ntTSL 2 BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 AL590822.2-201ENST00000606533 4196 ntBASIC10.79□□□□□ -0.68
LMO3Q8TAP4 TXLNA-202ENST00000373610 4854 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 CTBP2-203ENST00000337195 6939 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LMO3Q8TAP4 AC093904.4-201ENST00000565044 3273 ntBASIC10.78□□□□□ -0.68
LMO3Q8TAP4 MSH2-202ENST00000406134 3628 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 SPOCD1-202ENST00000360482 3960 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 BAAT-202ENST00000395051 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 LINC00494-201ENST00000416742 3544 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 NMNAT1-201ENST00000377205 3781 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 ATXN7L3-201ENST00000389384 3811 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 AC009494.1-201ENST00000406090 455 ntBASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 414.5 ms