Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
RTCBQ9Y3I0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RTCBQ9Y3I0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
RTCBQ9Y3I0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
RTCBQ9Y3I0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
RTCBQ9Y3I0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC26.59■■□□□ 1.85
RTCBQ9Y3I0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RTCBQ9Y3I0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RTCBQ9Y3I0 AC211429.1-201ENST00000415277 523 ntBASIC26.59■■□□□ 1.85
RTCBQ9Y3I0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC26.59■■□□□ 1.85
RTCBQ9Y3I0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC26.59■■□□□ 1.85
RTCBQ9Y3I0 SLC29A4P2-201ENST00000504749 1089 ntBASIC26.59■■□□□ 1.85
RTCBQ9Y3I0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC26.59■■□□□ 1.85
RTCBQ9Y3I0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
RTCBQ9Y3I0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC26.59■■□□□ 1.85
RTCBQ9Y3I0 AC069544.1-201ENST00000609399 999 ntBASIC26.59■■□□□ 1.85
RTCBQ9Y3I0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
RTCBQ9Y3I0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RTCBQ9Y3I0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RTCBQ9Y3I0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RTCBQ9Y3I0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC26.58■■□□□ 1.85
RTCBQ9Y3I0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC26.58■■□□□ 1.85
RTCBQ9Y3I0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RTCBQ9Y3I0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
RTCBQ9Y3I0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC26.58■■□□□ 1.85
RTCBQ9Y3I0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RTCBQ9Y3I0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RTCBQ9Y3I0 FAM210CP-201ENST00000445714 574 ntBASIC26.58■■□□□ 1.85
RTCBQ9Y3I0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC26.58■■□□□ 1.85
RTCBQ9Y3I0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC26.58■■□□□ 1.85
RTCBQ9Y3I0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RTCBQ9Y3I0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.85
RTCBQ9Y3I0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC26.58■■□□□ 1.85
RTCBQ9Y3I0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC26.57■■□□□ 1.84
RTCBQ9Y3I0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RTCBQ9Y3I0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC26.57■■□□□ 1.84
RTCBQ9Y3I0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
RTCBQ9Y3I0 MIR1224-201ENST00000408193 85 ntBASIC26.57■■□□□ 1.84
RTCBQ9Y3I0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RTCBQ9Y3I0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC26.57■■□□□ 1.84
RTCBQ9Y3I0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
RTCBQ9Y3I0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RTCBQ9Y3I0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RTCBQ9Y3I0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC26.56■■□□□ 1.84
RTCBQ9Y3I0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
RTCBQ9Y3I0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.56■■□□□ 1.84
RTCBQ9Y3I0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC26.56■■□□□ 1.84
RTCBQ9Y3I0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC26.56■■□□□ 1.84
RTCBQ9Y3I0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC26.56■■□□□ 1.84
RTCBQ9Y3I0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RTCBQ9Y3I0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
RTCBQ9Y3I0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
RTCBQ9Y3I0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC26.56■■□□□ 1.84
RTCBQ9Y3I0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC26.56■■□□□ 1.84
RTCBQ9Y3I0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RTCBQ9Y3I0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RTCBQ9Y3I0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RTCBQ9Y3I0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.55■■□□□ 1.84
RTCBQ9Y3I0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RTCBQ9Y3I0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
RTCBQ9Y3I0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RTCBQ9Y3I0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RTCBQ9Y3I0 SAPCD2P1-201ENST00000395413 1184 ntBASIC26.55■■□□□ 1.84
RTCBQ9Y3I0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
RTCBQ9Y3I0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC26.55■■□□□ 1.84
RTCBQ9Y3I0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RTCBQ9Y3I0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
RTCBQ9Y3I0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RTCBQ9Y3I0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC26.54■■□□□ 1.84
RTCBQ9Y3I0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RTCBQ9Y3I0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RTCBQ9Y3I0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RTCBQ9Y3I0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC26.54■■□□□ 1.84
RTCBQ9Y3I0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC26.54■■□□□ 1.84
RTCBQ9Y3I0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RTCBQ9Y3I0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC26.54■■□□□ 1.84
RTCBQ9Y3I0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RTCBQ9Y3I0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
RTCBQ9Y3I0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
RTCBQ9Y3I0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RTCBQ9Y3I0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RTCBQ9Y3I0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
RTCBQ9Y3I0 HES2-205ENST00000487437 968 ntTSL 3 BASIC26.53■■□□□ 1.84
RTCBQ9Y3I0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
RTCBQ9Y3I0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC26.53■■□□□ 1.84
RTCBQ9Y3I0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
RTCBQ9Y3I0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RTCBQ9Y3I0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RTCBQ9Y3I0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RTCBQ9Y3I0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
RTCBQ9Y3I0 POM121L13P-201ENST00000422362 380 ntBASIC26.52■■□□□ 1.84
RTCBQ9Y3I0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RTCBQ9Y3I0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RTCBQ9Y3I0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
RTCBQ9Y3I0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC26.52■■□□□ 1.84
RTCBQ9Y3I0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
RTCBQ9Y3I0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC26.52■■□□□ 1.84
RTCBQ9Y3I0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
RTCBQ9Y3I0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RTCBQ9Y3I0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC26.51■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms