Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.43■□□□□ 0.38
KCNIP3Q9Y2W7 KRT125P-201ENST00000546827 989 ntBASIC17.43■□□□□ 0.38
KCNIP3Q9Y2W7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.43■□□□□ 0.38
KCNIP3Q9Y2W7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNIP3Q9Y2W7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.43■□□□□ 0.38
KCNIP3Q9Y2W7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNIP3Q9Y2W7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
KCNIP3Q9Y2W7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.43■□□□□ 0.38
KCNIP3Q9Y2W7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KCNIP3Q9Y2W7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
KCNIP3Q9Y2W7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
KCNIP3Q9Y2W7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP3Q9Y2W7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP3Q9Y2W7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
KCNIP3Q9Y2W7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP3Q9Y2W7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP3Q9Y2W7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP3Q9Y2W7 AL451085.2-201ENST00000605085 799 ntBASIC17.42■□□□□ 0.38
KCNIP3Q9Y2W7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
KCNIP3Q9Y2W7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP3Q9Y2W7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
KCNIP3Q9Y2W7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP3Q9Y2W7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP3Q9Y2W7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
KCNIP3Q9Y2W7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP3Q9Y2W7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.42■□□□□ 0.38
KCNIP3Q9Y2W7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 AC007952.6-201ENST00000573168 2673 ntBASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 AC003957.1-201ENST00000625108 2673 ntBASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 Z92544.1-202ENST00000571933 1220 ntBASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 AL117332.1-201ENST00000622628 974 ntBASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP3Q9Y2W7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 AC010141.3-201ENST00000456659 717 ntBASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 AC003102.1-202ENST00000563394 1796 ntBASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP3Q9Y2W7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
KCNIP3Q9Y2W7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
KCNIP3Q9Y2W7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
KCNIP3Q9Y2W7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP3Q9Y2W7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
KCNIP3Q9Y2W7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP3Q9Y2W7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.39■□□□□ 0.37
KCNIP3Q9Y2W7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP3Q9Y2W7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.39■□□□□ 0.37
KCNIP3Q9Y2W7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP3Q9Y2W7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
KCNIP3Q9Y2W7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP3Q9Y2W7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
KCNIP3Q9Y2W7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.39■□□□□ 0.37
KCNIP3Q9Y2W7 AC010997.5-201ENST00000609182 354 ntBASIC17.39■□□□□ 0.37
KCNIP3Q9Y2W7 AC012354.3-201ENST00000623734 483 ntBASIC17.39■□□□□ 0.37
KCNIP3Q9Y2W7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP3Q9Y2W7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.39■□□□□ 0.37
KCNIP3Q9Y2W7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP3Q9Y2W7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.39■□□□□ 0.37
KCNIP3Q9Y2W7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms