Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF6Q9Y252 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF6Q9Y252 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF6Q9Y252 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF6Q9Y252 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF6Q9Y252 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF6Q9Y252 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF6Q9Y252 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF6Q9Y252 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF6Q9Y252 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF6Q9Y252 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF6Q9Y252 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF6Q9Y252 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF6Q9Y252 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF6Q9Y252 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF6Q9Y252 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF6Q9Y252 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.61■□□□□ 0.73
RNF6Q9Y252 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
RNF6Q9Y252 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF6Q9Y252 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF6Q9Y252 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF6Q9Y252 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF6Q9Y252 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF6Q9Y252 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF6Q9Y252 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF6Q9Y252 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
RNF6Q9Y252 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF6Q9Y252 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF6Q9Y252 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF6Q9Y252 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF6Q9Y252 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF6Q9Y252 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF6Q9Y252 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF6Q9Y252 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.6■□□□□ 0.73
RNF6Q9Y252 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF6Q9Y252 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.6■□□□□ 0.73
RNF6Q9Y252 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF6Q9Y252 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF6Q9Y252 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF6Q9Y252 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RNF6Q9Y252 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF6Q9Y252 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF6Q9Y252 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF6Q9Y252 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
RNF6Q9Y252 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RNF6Q9Y252 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF6Q9Y252 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF6Q9Y252 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF6Q9Y252 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF6Q9Y252 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF6Q9Y252 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
RNF6Q9Y252 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF6Q9Y252 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF6Q9Y252 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF6Q9Y252 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RNF6Q9Y252 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF6Q9Y252 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF6Q9Y252 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF6Q9Y252 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.58■□□□□ 0.73
RNF6Q9Y252 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF6Q9Y252 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF6Q9Y252 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF6Q9Y252 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF6Q9Y252 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF6Q9Y252 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RNF6Q9Y252 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.58■□□□□ 0.72
RNF6Q9Y252 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF6Q9Y252 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF6Q9Y252 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF6Q9Y252 AC026471.6-201ENST00000622954 1905 ntBASIC19.58■□□□□ 0.72
RNF6Q9Y252 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF6Q9Y252 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RNF6Q9Y252 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF6Q9Y252 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.58■□□□□ 0.72
RNF6Q9Y252 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.58■□□□□ 0.72
RNF6Q9Y252 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF6Q9Y252 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF6Q9Y252 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF6Q9Y252 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF6Q9Y252 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF6Q9Y252 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF6Q9Y252 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RNF6Q9Y252 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF6Q9Y252 LINC01006-201ENST00000333319 2292 ntBASIC19.57■□□□□ 0.72
RNF6Q9Y252 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RNF6Q9Y252 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF6Q9Y252 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF6Q9Y252 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.57■□□□□ 0.72
RNF6Q9Y252 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.57■□□□□ 0.72
RNF6Q9Y252 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.57■□□□□ 0.72
RNF6Q9Y252 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.57■□□□□ 0.72
RNF6Q9Y252 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF6Q9Y252 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF6Q9Y252 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF6Q9Y252 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF6Q9Y252 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF6Q9Y252 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF6Q9Y252 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF6Q9Y252 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF6Q9Y252 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms