Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NOTCH3Q9UM47 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH3Q9UM47 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH3Q9UM47 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.06■□□□□ 0.16
NOTCH3Q9UM47 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH3Q9UM47 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.06■□□□□ 0.16
NOTCH3Q9UM47 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH3Q9UM47 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.06■□□□□ 0.16
NOTCH3Q9UM47 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.06■□□□□ 0.16
NOTCH3Q9UM47 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NOTCH3Q9UM47 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.06■□□□□ 0.16
NOTCH3Q9UM47 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH3Q9UM47 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.06■□□□□ 0.16
NOTCH3Q9UM47 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NOTCH3Q9UM47 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.06■□□□□ 0.16
NOTCH3Q9UM47 AL158047.1-201ENST00000445918 881 ntBASIC16.06■□□□□ 0.16
NOTCH3Q9UM47 AP006587.3-201ENST00000525742 1516 ntBASIC16.06■□□□□ 0.16
NOTCH3Q9UM47 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NOTCH3Q9UM47 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NOTCH3Q9UM47 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NOTCH3Q9UM47 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NOTCH3Q9UM47 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NOTCH3Q9UM47 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NOTCH3Q9UM47 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NOTCH3Q9UM47 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NOTCH3Q9UM47 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.05■□□□□ 0.16
NOTCH3Q9UM47 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.05■□□□□ 0.16
NOTCH3Q9UM47 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.05■□□□□ 0.16
NOTCH3Q9UM47 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.05■□□□□ 0.16
NOTCH3Q9UM47 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NOTCH3Q9UM47 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NOTCH3Q9UM47 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC16.05■□□□□ 0.16
NOTCH3Q9UM47 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
NOTCH3Q9UM47 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NOTCH3Q9UM47 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NOTCH3Q9UM47 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
NOTCH3Q9UM47 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.05■□□□□ 0.16
NOTCH3Q9UM47 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.05■□□□□ 0.16
NOTCH3Q9UM47 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NOTCH3Q9UM47 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.04■□□□□ 0.16
NOTCH3Q9UM47 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NOTCH3Q9UM47 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NOTCH3Q9UM47 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.04■□□□□ 0.16
NOTCH3Q9UM47 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.04■□□□□ 0.16
NOTCH3Q9UM47 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NOTCH3Q9UM47 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.04■□□□□ 0.16
NOTCH3Q9UM47 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NOTCH3Q9UM47 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NOTCH3Q9UM47 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.04■□□□□ 0.16
NOTCH3Q9UM47 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NOTCH3Q9UM47 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NOTCH3Q9UM47 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NOTCH3Q9UM47 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NOTCH3Q9UM47 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NOTCH3Q9UM47 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 AC026366.1-201ENST00000488803 879 ntBASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 RBM17P2-201ENST00000616397 1405 ntBASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
NOTCH3Q9UM47 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NOTCH3Q9UM47 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NOTCH3Q9UM47 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NOTCH3Q9UM47 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NOTCH3Q9UM47 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
NOTCH3Q9UM47 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NOTCH3Q9UM47 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
NOTCH3Q9UM47 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.02■□□□□ 0.16
NOTCH3Q9UM47 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.02■□□□□ 0.16
NOTCH3Q9UM47 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.02■□□□□ 0.16
NOTCH3Q9UM47 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
NOTCH3Q9UM47 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.02■□□□□ 0.16
NOTCH3Q9UM47 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.02■□□□□ 0.16
NOTCH3Q9UM47 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NOTCH3Q9UM47 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NOTCH3Q9UM47 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
NOTCH3Q9UM47 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms