Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.48■□□□□ 0.87
NLGN3Q9NZ94 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NLGN3Q9NZ94 AC003102.1-202ENST00000563394 1796 ntBASIC20.48■□□□□ 0.87
NLGN3Q9NZ94 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.48■□□□□ 0.87
NLGN3Q9NZ94 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NLGN3Q9NZ94 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NLGN3Q9NZ94 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NLGN3Q9NZ94 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NLGN3Q9NZ94 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NLGN3Q9NZ94 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
NLGN3Q9NZ94 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NLGN3Q9NZ94 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NLGN3Q9NZ94 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
NLGN3Q9NZ94 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.47■□□□□ 0.87
NLGN3Q9NZ94 AC008687.6-201ENST00000596318 630 ntBASIC20.47■□□□□ 0.87
NLGN3Q9NZ94 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
NLGN3Q9NZ94 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NLGN3Q9NZ94 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NLGN3Q9NZ94 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.47■□□□□ 0.87
NLGN3Q9NZ94 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NLGN3Q9NZ94 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 AC091874.3-201ENST00000512672 1195 ntBASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.46■□□□□ 0.87
NLGN3Q9NZ94 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NLGN3Q9NZ94 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
NLGN3Q9NZ94 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NLGN3Q9NZ94 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NLGN3Q9NZ94 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.45■□□□□ 0.86
NLGN3Q9NZ94 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NLGN3Q9NZ94 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NLGN3Q9NZ94 GUSBP5-202ENST00000510805 1989 ntBASIC20.45■□□□□ 0.86
NLGN3Q9NZ94 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NLGN3Q9NZ94 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.45■□□□□ 0.86
NLGN3Q9NZ94 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.45■□□□□ 0.86
NLGN3Q9NZ94 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
NLGN3Q9NZ94 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
NLGN3Q9NZ94 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NLGN3Q9NZ94 AC092053.2-201ENST00000640557 1818 ntBASIC20.45■□□□□ 0.86
NLGN3Q9NZ94 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NLGN3Q9NZ94 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
NLGN3Q9NZ94 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NLGN3Q9NZ94 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NLGN3Q9NZ94 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.44■□□□□ 0.86
NLGN3Q9NZ94 DUSP5P2-201ENST00000426873 1033 ntBASIC20.44■□□□□ 0.86
NLGN3Q9NZ94 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
NLGN3Q9NZ94 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NLGN3Q9NZ94 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NLGN3Q9NZ94 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NLGN3Q9NZ94 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NLGN3Q9NZ94 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NLGN3Q9NZ94 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.44■□□□□ 0.86
NLGN3Q9NZ94 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
NLGN3Q9NZ94 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NLGN3Q9NZ94 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.43■□□□□ 0.86
NLGN3Q9NZ94 EP400NL-214ENST00000641289 2402 ntBASIC20.43■□□□□ 0.86
NLGN3Q9NZ94 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NLGN3Q9NZ94 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NLGN3Q9NZ94 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.43■□□□□ 0.86
NLGN3Q9NZ94 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NLGN3Q9NZ94 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.43■□□□□ 0.86
NLGN3Q9NZ94 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.43■□□□□ 0.86
NLGN3Q9NZ94 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NLGN3Q9NZ94 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NLGN3Q9NZ94 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
NLGN3Q9NZ94 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NLGN3Q9NZ94 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NLGN3Q9NZ94 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NLGN3Q9NZ94 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NLGN3Q9NZ94 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NLGN3Q9NZ94 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NLGN3Q9NZ94 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NLGN3Q9NZ94 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NLGN3Q9NZ94 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NLGN3Q9NZ94 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NLGN3Q9NZ94 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NLGN3Q9NZ94 PRORSD1P-201ENST00000295112 541 ntBASIC20.42■□□□□ 0.86
NLGN3Q9NZ94 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NLGN3Q9NZ94 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
NLGN3Q9NZ94 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.42■□□□□ 0.86
NLGN3Q9NZ94 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.42■□□□□ 0.86
NLGN3Q9NZ94 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms