Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NEUROD4Q9HD90 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NEUROD4Q9HD90 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NEUROD4Q9HD90 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NEUROD4Q9HD90 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NEUROD4Q9HD90 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.69■□□□□ 0.74
NEUROD4Q9HD90 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NEUROD4Q9HD90 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NEUROD4Q9HD90 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.68■□□□□ 0.74
NEUROD4Q9HD90 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEUROD4Q9HD90 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.68■□□□□ 0.74
NEUROD4Q9HD90 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEUROD4Q9HD90 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEUROD4Q9HD90 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEUROD4Q9HD90 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEUROD4Q9HD90 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NEUROD4Q9HD90 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NEUROD4Q9HD90 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NEUROD4Q9HD90 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEUROD4Q9HD90 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.68■□□□□ 0.74
NEUROD4Q9HD90 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.68■□□□□ 0.74
NEUROD4Q9HD90 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEUROD4Q9HD90 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NEUROD4Q9HD90 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEUROD4Q9HD90 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NEUROD4Q9HD90 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.67■□□□□ 0.74
NEUROD4Q9HD90 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEUROD4Q9HD90 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEUROD4Q9HD90 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEUROD4Q9HD90 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NEUROD4Q9HD90 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.67■□□□□ 0.74
NEUROD4Q9HD90 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.67■□□□□ 0.74
NEUROD4Q9HD90 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.67■□□□□ 0.74
NEUROD4Q9HD90 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEUROD4Q9HD90 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEUROD4Q9HD90 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NEUROD4Q9HD90 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.67■□□□□ 0.74
NEUROD4Q9HD90 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NEUROD4Q9HD90 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEUROD4Q9HD90 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NEUROD4Q9HD90 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NEUROD4Q9HD90 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
NEUROD4Q9HD90 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.66■□□□□ 0.74
NEUROD4Q9HD90 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEUROD4Q9HD90 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEUROD4Q9HD90 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEUROD4Q9HD90 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEUROD4Q9HD90 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
NEUROD4Q9HD90 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NEUROD4Q9HD90 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NEUROD4Q9HD90 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NEUROD4Q9HD90 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NEUROD4Q9HD90 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NEUROD4Q9HD90 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.66■□□□□ 0.74
NEUROD4Q9HD90 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NEUROD4Q9HD90 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NEUROD4Q9HD90 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEUROD4Q9HD90 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NEUROD4Q9HD90 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NEUROD4Q9HD90 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NEUROD4Q9HD90 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NEUROD4Q9HD90 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NEUROD4Q9HD90 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.65■□□□□ 0.74
NEUROD4Q9HD90 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NEUROD4Q9HD90 IRS3P-201ENST00000223076 1006 ntBASIC19.65■□□□□ 0.74
NEUROD4Q9HD90 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NEUROD4Q9HD90 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.65■□□□□ 0.74
NEUROD4Q9HD90 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NEUROD4Q9HD90 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NEUROD4Q9HD90 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
NEUROD4Q9HD90 KRT87P-202ENST00000534226 1464 ntBASIC19.65■□□□□ 0.74
NEUROD4Q9HD90 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.65■□□□□ 0.74
NEUROD4Q9HD90 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.65■□□□□ 0.74
NEUROD4Q9HD90 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
NEUROD4Q9HD90 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
NEUROD4Q9HD90 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NEUROD4Q9HD90 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NEUROD4Q9HD90 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NEUROD4Q9HD90 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NEUROD4Q9HD90 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NEUROD4Q9HD90 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
NEUROD4Q9HD90 AC027612.3-201ENST00000413684 1047 ntBASIC19.64■□□□□ 0.73
NEUROD4Q9HD90 AL162430.1-201ENST00000480705 870 ntBASIC19.64■□□□□ 0.73
NEUROD4Q9HD90 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.64■□□□□ 0.73
NEUROD4Q9HD90 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.64■□□□□ 0.73
NEUROD4Q9HD90 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NEUROD4Q9HD90 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.64■□□□□ 0.73
NEUROD4Q9HD90 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NEUROD4Q9HD90 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.64■□□□□ 0.73
NEUROD4Q9HD90 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NEUROD4Q9HD90 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NEUROD4Q9HD90 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.64■□□□□ 0.73
NEUROD4Q9HD90 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NEUROD4Q9HD90 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NEUROD4Q9HD90 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.64■□□□□ 0.73
NEUROD4Q9HD90 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
NEUROD4Q9HD90 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.64■□□□□ 0.73
NEUROD4Q9HD90 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NEUROD4Q9HD90 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NEUROD4Q9HD90 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms