Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD8Q9HCK8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD8Q9HCK8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.76■□□□□ 0.75
CHD8Q9HCK8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CHD8Q9HCK8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD8Q9HCK8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD8Q9HCK8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD8Q9HCK8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD8Q9HCK8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.76■□□□□ 0.75
CHD8Q9HCK8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CHD8Q9HCK8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD8Q9HCK8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CHD8Q9HCK8 MMP23A-201ENST00000234610 1017 ntBASIC19.76■□□□□ 0.75
CHD8Q9HCK8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD8Q9HCK8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.76■□□□□ 0.75
CHD8Q9HCK8 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.76■□□□□ 0.75
CHD8Q9HCK8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
CHD8Q9HCK8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD8Q9HCK8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CHD8Q9HCK8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD8Q9HCK8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD8Q9HCK8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD8Q9HCK8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD8Q9HCK8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.75■□□□□ 0.75
CHD8Q9HCK8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.75■□□□□ 0.75
CHD8Q9HCK8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD8Q9HCK8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD8Q9HCK8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD8Q9HCK8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD8Q9HCK8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD8Q9HCK8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CHD8Q9HCK8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.75■□□□□ 0.75
CHD8Q9HCK8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD8Q9HCK8 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHD8Q9HCK8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHD8Q9HCK8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CHD8Q9HCK8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD8Q9HCK8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD8Q9HCK8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD8Q9HCK8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.74■□□□□ 0.75
CHD8Q9HCK8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CHD8Q9HCK8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.74■□□□□ 0.75
CHD8Q9HCK8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD8Q9HCK8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.74■□□□□ 0.75
CHD8Q9HCK8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD8Q9HCK8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.74■□□□□ 0.75
CHD8Q9HCK8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CHD8Q9HCK8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
CHD8Q9HCK8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.74■□□□□ 0.75
CHD8Q9HCK8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CHD8Q9HCK8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
CHD8Q9HCK8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CHD8Q9HCK8 AC142086.6-201ENST00000621154 1765 ntBASIC19.73■□□□□ 0.75
CHD8Q9HCK8 AC022211.4-201ENST00000625094 2161 ntBASIC19.73■□□□□ 0.75
CHD8Q9HCK8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD8Q9HCK8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD8Q9HCK8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD8Q9HCK8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.73■□□□□ 0.75
CHD8Q9HCK8 AL450487.1-201ENST00000426799 995 ntBASIC19.73■□□□□ 0.75
CHD8Q9HCK8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.73■□□□□ 0.75
CHD8Q9HCK8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.73■□□□□ 0.75
CHD8Q9HCK8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD8Q9HCK8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD8Q9HCK8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.73■□□□□ 0.75
CHD8Q9HCK8 AC009947.2-201ENST00000444014 672 ntBASIC19.73■□□□□ 0.75
CHD8Q9HCK8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD8Q9HCK8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.73■□□□□ 0.75
CHD8Q9HCK8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD8Q9HCK8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD8Q9HCK8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.73■□□□□ 0.75
CHD8Q9HCK8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CHD8Q9HCK8 LINC01568-207ENST00000641790 1380 ntBASIC19.72■□□□□ 0.75
CHD8Q9HCK8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD8Q9HCK8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CHD8Q9HCK8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
CHD8Q9HCK8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD8Q9HCK8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD8Q9HCK8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CHD8Q9HCK8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD8Q9HCK8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD8Q9HCK8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD8Q9HCK8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD8Q9HCK8 AP006587.3-201ENST00000525742 1516 ntBASIC19.72■□□□□ 0.75
CHD8Q9HCK8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD8Q9HCK8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD8Q9HCK8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.72■□□□□ 0.75
CHD8Q9HCK8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.72■□□□□ 0.75
CHD8Q9HCK8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD8Q9HCK8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.72■□□□□ 0.75
CHD8Q9HCK8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.72■□□□□ 0.75
CHD8Q9HCK8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.71■□□□□ 0.75
CHD8Q9HCK8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
CHD8Q9HCK8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHD8Q9HCK8 AC243732.1-201ENST00000612648 864 ntBASIC19.71■□□□□ 0.75
CHD8Q9HCK8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHD8Q9HCK8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CHD8Q9HCK8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD8Q9HCK8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHD8Q9HCK8 AC004263.2-201ENST00000617183 678 ntBASIC19.71■□□□□ 0.75
CHD8Q9HCK8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms