Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH9Q9HC56 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH9Q9HC56 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH9Q9HC56 AC055733.4-201ENST00000638462 1354 ntBASIC21.57■■□□□ 1.04
PCDH9Q9HC56 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDH9Q9HC56 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH9Q9HC56 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH9Q9HC56 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDH9Q9HC56 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH9Q9HC56 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH9Q9HC56 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH9Q9HC56 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH9Q9HC56 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH9Q9HC56 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.56■■□□□ 1.04
PCDH9Q9HC56 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH9Q9HC56 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
PCDH9Q9HC56 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH9Q9HC56 LINC02228-203ENST00000641970 1355 ntBASIC21.56■■□□□ 1.04
PCDH9Q9HC56 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH9Q9HC56 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH9Q9HC56 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDH9Q9HC56 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDH9Q9HC56 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PCDH9Q9HC56 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH9Q9HC56 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PCDH9Q9HC56 FEM1AP1-201ENST00000431297 1995 ntBASIC21.56■■□□□ 1.04
PCDH9Q9HC56 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH9Q9HC56 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDH9Q9HC56 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.55■■□□□ 1.04
PCDH9Q9HC56 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH9Q9HC56 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.55■■□□□ 1.04
PCDH9Q9HC56 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PCDH9Q9HC56 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH9Q9HC56 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDH9Q9HC56 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH9Q9HC56 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDH9Q9HC56 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH9Q9HC56 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PCDH9Q9HC56 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH9Q9HC56 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH9Q9HC56 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH9Q9HC56 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH9Q9HC56 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PCDH9Q9HC56 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PCDH9Q9HC56 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.54■■□□□ 1.04
PCDH9Q9HC56 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDH9Q9HC56 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
PCDH9Q9HC56 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH9Q9HC56 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PCDH9Q9HC56 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDH9Q9HC56 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PCDH9Q9HC56 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH9Q9HC56 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH9Q9HC56 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDH9Q9HC56 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.54■■□□□ 1.04
PCDH9Q9HC56 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH9Q9HC56 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH9Q9HC56 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH9Q9HC56 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH9Q9HC56 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDH9Q9HC56 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH9Q9HC56 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH9Q9HC56 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDH9Q9HC56 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH9Q9HC56 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH9Q9HC56 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH9Q9HC56 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PCDH9Q9HC56 AC006128.1-201ENST00000624704 1661 ntBASIC21.53■■□□□ 1.04
PCDH9Q9HC56 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH9Q9HC56 LINC01006-201ENST00000333319 2292 ntBASIC21.53■■□□□ 1.04
PCDH9Q9HC56 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH9Q9HC56 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH9Q9HC56 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH9Q9HC56 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.53■■□□□ 1.04
PCDH9Q9HC56 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH9Q9HC56 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDH9Q9HC56 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.53■■□□□ 1.04
PCDH9Q9HC56 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDH9Q9HC56 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PCDH9Q9HC56 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDH9Q9HC56 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.53■■□□□ 1.04
PCDH9Q9HC56 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH9Q9HC56 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH9Q9HC56 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDH9Q9HC56 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH9Q9HC56 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PCDH9Q9HC56 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH9Q9HC56 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.52■■□□□ 1.04
PCDH9Q9HC56 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH9Q9HC56 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDH9Q9HC56 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH9Q9HC56 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.52■■□□□ 1.03
PCDH9Q9HC56 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PCDH9Q9HC56 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PCDH9Q9HC56 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
PCDH9Q9HC56 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.03
PCDH9Q9HC56 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDH9Q9HC56 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH9Q9HC56 PLK5-205ENST00000642079 1969 ntBASIC21.51■■□□□ 1.03
PCDH9Q9HC56 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms