Protein–RNA interactions for Protein: Q9H7V2

SYNDIG1, Synapse differentiation-inducing gene protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1Q9H7V2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNDIG1Q9H7V2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.38■□□□□ 0.85
SYNDIG1Q9H7V2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNDIG1Q9H7V2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SYNDIG1Q9H7V2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.38■□□□□ 0.85
SYNDIG1Q9H7V2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNDIG1Q9H7V2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNDIG1Q9H7V2 AC233723.2-201ENST00000623798 2106 ntBASIC20.38■□□□□ 0.85
SYNDIG1Q9H7V2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNDIG1Q9H7V2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNDIG1Q9H7V2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNDIG1Q9H7V2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNDIG1Q9H7V2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNDIG1Q9H7V2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNDIG1Q9H7V2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SYNDIG1Q9H7V2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SYNDIG1Q9H7V2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNDIG1Q9H7V2 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.37■□□□□ 0.85
SYNDIG1Q9H7V2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SYNDIG1Q9H7V2 AC007322.4-201ENST00000509611 723 ntBASIC20.37■□□□□ 0.85
SYNDIG1Q9H7V2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.37■□□□□ 0.85
SYNDIG1Q9H7V2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.37■□□□□ 0.85
SYNDIG1Q9H7V2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNDIG1Q9H7V2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.37■□□□□ 0.85
SYNDIG1Q9H7V2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.37■□□□□ 0.85
SYNDIG1Q9H7V2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNDIG1Q9H7V2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNDIG1Q9H7V2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SYNDIG1Q9H7V2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNDIG1Q9H7V2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNDIG1Q9H7V2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 LINC00565-201ENST00000562710 2331 ntBASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNDIG1Q9H7V2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNDIG1Q9H7V2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.35■□□□□ 0.85
SYNDIG1Q9H7V2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNDIG1Q9H7V2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNDIG1Q9H7V2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNDIG1Q9H7V2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNDIG1Q9H7V2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNDIG1Q9H7V2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.35■□□□□ 0.85
SYNDIG1Q9H7V2 KRT18P29-201ENST00000397031 1267 ntBASIC20.35■□□□□ 0.85
SYNDIG1Q9H7V2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.35■□□□□ 0.85
SYNDIG1Q9H7V2 AC073210.2-201ENST00000430369 194 ntBASIC20.35■□□□□ 0.85
SYNDIG1Q9H7V2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.35■□□□□ 0.85
SYNDIG1Q9H7V2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.35■□□□□ 0.85
SYNDIG1Q9H7V2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.35■□□□□ 0.85
SYNDIG1Q9H7V2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.35■□□□□ 0.85
SYNDIG1Q9H7V2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.35■□□□□ 0.85
SYNDIG1Q9H7V2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNDIG1Q9H7V2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNDIG1Q9H7V2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNDIG1Q9H7V2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNDIG1Q9H7V2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNDIG1Q9H7V2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.34■□□□□ 0.85
SYNDIG1Q9H7V2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SYNDIG1Q9H7V2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYNDIG1Q9H7V2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SYNDIG1Q9H7V2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYNDIG1Q9H7V2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.34■□□□□ 0.85
SYNDIG1Q9H7V2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SYNDIG1Q9H7V2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYNDIG1Q9H7V2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYNDIG1Q9H7V2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.34■□□□□ 0.85
SYNDIG1Q9H7V2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.34■□□□□ 0.85
SYNDIG1Q9H7V2 POU5F1P3-201ENST00000428824 1078 ntBASIC20.34■□□□□ 0.85
SYNDIG1Q9H7V2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYNDIG1Q9H7V2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.34■□□□□ 0.85
SYNDIG1Q9H7V2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.34■□□□□ 0.85
SYNDIG1Q9H7V2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYNDIG1Q9H7V2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SYNDIG1Q9H7V2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SYNDIG1Q9H7V2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.34■□□□□ 0.85
SYNDIG1Q9H7V2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SYNDIG1Q9H7V2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SYNDIG1Q9H7V2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SYNDIG1Q9H7V2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms