Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHMP4BQ9H444 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHMP4BQ9H444 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHMP4BQ9H444 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHMP4BQ9H444 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CHMP4BQ9H444 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.34■■□□□ 1.81
CHMP4BQ9H444 KRT18P14-201ENST00000534205 1250 ntBASIC26.34■■□□□ 1.81
CHMP4BQ9H444 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.34■■□□□ 1.81
CHMP4BQ9H444 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CHMP4BQ9H444 CCDC92B-201ENST00000575506 885 ntBASIC26.34■■□□□ 1.81
CHMP4BQ9H444 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CHMP4BQ9H444 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC26.34■■□□□ 1.81
CHMP4BQ9H444 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC26.34■■□□□ 1.81
CHMP4BQ9H444 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CHMP4BQ9H444 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
CHMP4BQ9H444 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHMP4BQ9H444 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHMP4BQ9H444 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CHMP4BQ9H444 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHMP4BQ9H444 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CHMP4BQ9H444 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHMP4BQ9H444 KRT18P20-201ENST00000548986 1279 ntBASIC26.33■■□□□ 1.81
CHMP4BQ9H444 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC26.33■■□□□ 1.81
CHMP4BQ9H444 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC26.33■■□□□ 1.81
CHMP4BQ9H444 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC26.33■■□□□ 1.81
CHMP4BQ9H444 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CHMP4BQ9H444 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CHMP4BQ9H444 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CHMP4BQ9H444 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHMP4BQ9H444 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
CHMP4BQ9H444 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHMP4BQ9H444 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
CHMP4BQ9H444 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC26.32■■□□□ 1.8
CHMP4BQ9H444 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC26.32■■□□□ 1.8
CHMP4BQ9H444 TESC-206ENST00000541210 936 ntTSL 3 BASIC26.32■■□□□ 1.8
CHMP4BQ9H444 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC26.32■■□□□ 1.8
CHMP4BQ9H444 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHMP4BQ9H444 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CHMP4BQ9H444 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CHMP4BQ9H444 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC26.32■■□□□ 1.8
CHMP4BQ9H444 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHMP4BQ9H444 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC26.32■■□□□ 1.8
CHMP4BQ9H444 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHMP4BQ9H444 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CHMP4BQ9H444 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHMP4BQ9H444 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CHMP4BQ9H444 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.31■■□□□ 1.8
CHMP4BQ9H444 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CHMP4BQ9H444 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC26.31■■□□□ 1.8
CHMP4BQ9H444 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC26.31■■□□□ 1.8
CHMP4BQ9H444 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC26.31■■□□□ 1.8
CHMP4BQ9H444 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC26.31■■□□□ 1.8
CHMP4BQ9H444 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHMP4BQ9H444 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHMP4BQ9H444 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHMP4BQ9H444 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHMP4BQ9H444 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC26.3■■□□□ 1.8
CHMP4BQ9H444 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CHMP4BQ9H444 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CHMP4BQ9H444 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CHMP4BQ9H444 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHMP4BQ9H444 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
CHMP4BQ9H444 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
CHMP4BQ9H444 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHMP4BQ9H444 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CHMP4BQ9H444 COX20-201ENST00000366528 568 ntTSL 2 BASIC26.3■■□□□ 1.8
CHMP4BQ9H444 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHMP4BQ9H444 AC104187.1-201ENST00000607510 612 ntBASIC26.3■■□□□ 1.8
CHMP4BQ9H444 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC26.29■■□□□ 1.8
CHMP4BQ9H444 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHMP4BQ9H444 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC26.29■■□□□ 1.8
CHMP4BQ9H444 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
CHMP4BQ9H444 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHMP4BQ9H444 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC26.29■■□□□ 1.8
CHMP4BQ9H444 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC26.29■■□□□ 1.8
CHMP4BQ9H444 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC26.29■■□□□ 1.8
CHMP4BQ9H444 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC26.29■■□□□ 1.8
CHMP4BQ9H444 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC26.29■■□□□ 1.8
CHMP4BQ9H444 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC26.29■■□□□ 1.8
CHMP4BQ9H444 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHMP4BQ9H444 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHMP4BQ9H444 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHMP4BQ9H444 USP48-205ENST00000421625 2818 ntTSL 2 BASIC26.28■■□□□ 1.8
CHMP4BQ9H444 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHMP4BQ9H444 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHMP4BQ9H444 AP001160.3-201ENST00000601484 763 ntBASIC26.28■■□□□ 1.8
CHMP4BQ9H444 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHMP4BQ9H444 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC26.28■■□□□ 1.8
CHMP4BQ9H444 AC121338.2-201ENST00000622535 1744 ntBASIC26.28■■□□□ 1.8
CHMP4BQ9H444 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CHMP4BQ9H444 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC26.27■■□□□ 1.8
CHMP4BQ9H444 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CHMP4BQ9H444 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CHMP4BQ9H444 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CHMP4BQ9H444 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC26.27■■□□□ 1.8
CHMP4BQ9H444 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CHMP4BQ9H444 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHMP4BQ9H444 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC26.27■■□□□ 1.8
CHMP4BQ9H444 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHMP4BQ9H444 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms