Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.54■□□□□ 0.24
CHRDL1Q9BU40 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRDL1Q9BU40 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CHRDL1Q9BU40 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CHRDL1Q9BU40 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CHRDL1Q9BU40 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CHRDL1Q9BU40 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRDL1Q9BU40 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.54■□□□□ 0.24
CHRDL1Q9BU40 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 SUDS3P1-201ENST00000505831 966 ntBASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRDL1Q9BU40 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHRDL1Q9BU40 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRDL1Q9BU40 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRDL1Q9BU40 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CHRDL1Q9BU40 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRDL1Q9BU40 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRDL1Q9BU40 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRDL1Q9BU40 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.52■□□□□ 0.24
CHRDL1Q9BU40 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHRDL1Q9BU40 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CHRDL1Q9BU40 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.52■□□□□ 0.24
CHRDL1Q9BU40 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.52■□□□□ 0.24
CHRDL1Q9BU40 AC104564.3-201ENST00000582367 638 ntBASIC16.52■□□□□ 0.24
CHRDL1Q9BU40 AC105233.4-201ENST00000642045 216 ntBASIC16.52■□□□□ 0.24
CHRDL1Q9BU40 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRDL1Q9BU40 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRDL1Q9BU40 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHRDL1Q9BU40 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
CHRDL1Q9BU40 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CHRDL1Q9BU40 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.52■□□□□ 0.23
CHRDL1Q9BU40 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.52■□□□□ 0.23
CHRDL1Q9BU40 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CHRDL1Q9BU40 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 AC003102.1-202ENST00000563394 1796 ntBASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 Z98882.1-201ENST00000622160 2253 ntBASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.51■□□□□ 0.23
CHRDL1Q9BU40 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CHRDL1Q9BU40 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRDL1Q9BU40 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHRDL1Q9BU40 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRDL1Q9BU40 AP006587.3-201ENST00000525742 1516 ntBASIC16.5■□□□□ 0.23
CHRDL1Q9BU40 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRDL1Q9BU40 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.5■□□□□ 0.23
CHRDL1Q9BU40 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRDL1Q9BU40 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRDL1Q9BU40 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.5■□□□□ 0.23
CHRDL1Q9BU40 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.5■□□□□ 0.23
CHRDL1Q9BU40 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CHRDL1Q9BU40 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.5■□□□□ 0.23
CHRDL1Q9BU40 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRDL1Q9BU40 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.5■□□□□ 0.23
CHRDL1Q9BU40 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.5■□□□□ 0.23
CHRDL1Q9BU40 HCG11-201ENST00000411553 5696 ntBASIC16.5■□□□□ 0.23
CHRDL1Q9BU40 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CHRDL1Q9BU40 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.5■□□□□ 0.23
CHRDL1Q9BU40 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms