Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.56■□□□□ 0.56
USB1Q9BQ65 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USB1Q9BQ65 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
USB1Q9BQ65 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.56■□□□□ 0.56
USB1Q9BQ65 MYCNOS-205ENST00000641950 531 ntBASIC18.56■□□□□ 0.56
USB1Q9BQ65 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
USB1Q9BQ65 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USB1Q9BQ65 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.56■□□□□ 0.56
USB1Q9BQ65 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.56■□□□□ 0.56
USB1Q9BQ65 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USB1Q9BQ65 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
USB1Q9BQ65 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USB1Q9BQ65 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USB1Q9BQ65 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.55■□□□□ 0.56
USB1Q9BQ65 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
USB1Q9BQ65 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
USB1Q9BQ65 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USB1Q9BQ65 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USB1Q9BQ65 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USB1Q9BQ65 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.55■□□□□ 0.56
USB1Q9BQ65 CDCA4P2-201ENST00000441182 718 ntBASIC18.55■□□□□ 0.56
USB1Q9BQ65 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USB1Q9BQ65 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.55■□□□□ 0.56
USB1Q9BQ65 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.55■□□□□ 0.56
USB1Q9BQ65 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.55■□□□□ 0.56
USB1Q9BQ65 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.55■□□□□ 0.56
USB1Q9BQ65 AC092053.2-201ENST00000640557 1818 ntBASIC18.55■□□□□ 0.56
USB1Q9BQ65 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USB1Q9BQ65 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USB1Q9BQ65 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
USB1Q9BQ65 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USB1Q9BQ65 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
USB1Q9BQ65 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USB1Q9BQ65 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.55■□□□□ 0.56
USB1Q9BQ65 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
USB1Q9BQ65 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USB1Q9BQ65 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USB1Q9BQ65 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
USB1Q9BQ65 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USB1Q9BQ65 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USB1Q9BQ65 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USB1Q9BQ65 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
USB1Q9BQ65 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
USB1Q9BQ65 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USB1Q9BQ65 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.54■□□□□ 0.56
USB1Q9BQ65 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.54■□□□□ 0.56
USB1Q9BQ65 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.54■□□□□ 0.56
USB1Q9BQ65 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
USB1Q9BQ65 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.54■□□□□ 0.56
USB1Q9BQ65 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.54■□□□□ 0.56
USB1Q9BQ65 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USB1Q9BQ65 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
USB1Q9BQ65 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
USB1Q9BQ65 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USB1Q9BQ65 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
USB1Q9BQ65 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USB1Q9BQ65 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USB1Q9BQ65 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
USB1Q9BQ65 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
USB1Q9BQ65 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.53■□□□□ 0.56
USB1Q9BQ65 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USB1Q9BQ65 ID1-201ENST00000376105 1233 ntBASIC18.53■□□□□ 0.56
USB1Q9BQ65 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
USB1Q9BQ65 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USB1Q9BQ65 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USB1Q9BQ65 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.53■□□□□ 0.56
USB1Q9BQ65 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.53■□□□□ 0.56
USB1Q9BQ65 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.53■□□□□ 0.56
USB1Q9BQ65 RAP2CP1-201ENST00000605103 478 ntBASIC18.53■□□□□ 0.56
USB1Q9BQ65 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.53■□□□□ 0.56
USB1Q9BQ65 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USB1Q9BQ65 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USB1Q9BQ65 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.53■□□□□ 0.56
USB1Q9BQ65 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
USB1Q9BQ65 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USB1Q9BQ65 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USB1Q9BQ65 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
USB1Q9BQ65 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.52■□□□□ 0.56
USB1Q9BQ65 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USB1Q9BQ65 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USB1Q9BQ65 AC073130.3-201ENST00000624389 2278 ntBASIC18.52■□□□□ 0.56
USB1Q9BQ65 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.52■□□□□ 0.56
USB1Q9BQ65 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
USB1Q9BQ65 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.52■□□□□ 0.56
USB1Q9BQ65 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.52■□□□□ 0.56
USB1Q9BQ65 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.52■□□□□ 0.56
USB1Q9BQ65 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
USB1Q9BQ65 UBE2DNL-204ENST00000602536 740 ntBASIC18.52■□□□□ 0.56
USB1Q9BQ65 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USB1Q9BQ65 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.52■□□□□ 0.56
USB1Q9BQ65 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
USB1Q9BQ65 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.52■□□□□ 0.56
USB1Q9BQ65 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.52■□□□□ 0.56
USB1Q9BQ65 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
USB1Q9BQ65 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.52■□□□□ 0.56
USB1Q9BQ65 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USB1Q9BQ65 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
USB1Q9BQ65 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
USB1Q9BQ65 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
USB1Q9BQ65 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms