Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM5Q96HC4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM5Q96HC4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.44■□□□□ 0.86
PDLIM5Q96HC4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM5Q96HC4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM5Q96HC4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM5Q96HC4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.43■□□□□ 0.86
PDLIM5Q96HC4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.43■□□□□ 0.86
PDLIM5Q96HC4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM5Q96HC4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM5Q96HC4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM5Q96HC4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.43■□□□□ 0.86
PDLIM5Q96HC4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.43■□□□□ 0.86
PDLIM5Q96HC4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.43■□□□□ 0.86
PDLIM5Q96HC4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.43■□□□□ 0.86
PDLIM5Q96HC4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.43■□□□□ 0.86
PDLIM5Q96HC4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM5Q96HC4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM5Q96HC4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.43■□□□□ 0.86
PDLIM5Q96HC4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM5Q96HC4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
PDLIM5Q96HC4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM5Q96HC4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM5Q96HC4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.42■□□□□ 0.86
PDLIM5Q96HC4 KRT18P14-201ENST00000534205 1250 ntBASIC20.42■□□□□ 0.86
PDLIM5Q96HC4 DUX4L2-201ENST00000561772 1275 ntBASIC20.42■□□□□ 0.86
PDLIM5Q96HC4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
PDLIM5Q96HC4 DUX4L6-201ENST00000626483 1275 ntBASIC20.42■□□□□ 0.86
PDLIM5Q96HC4 DUX4L1-201ENST00000627662 1275 ntBASIC20.42■□□□□ 0.86
PDLIM5Q96HC4 DUX4L8-201ENST00000629013 1275 ntBASIC20.42■□□□□ 0.86
PDLIM5Q96HC4 DUX4L3-201ENST00000630187 1275 ntBASIC20.42■□□□□ 0.86
PDLIM5Q96HC4 DUX4L7-201ENST00000630678 1275 ntBASIC20.42■□□□□ 0.86
PDLIM5Q96HC4 DUX4L5-201ENST00000630834 1275 ntBASIC20.42■□□□□ 0.86
PDLIM5Q96HC4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.42■□□□□ 0.86
PDLIM5Q96HC4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM5Q96HC4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PDLIM5Q96HC4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.42■□□□□ 0.86
PDLIM5Q96HC4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM5Q96HC4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM5Q96HC4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.41■□□□□ 0.86
PDLIM5Q96HC4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM5Q96HC4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM5Q96HC4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.41■□□□□ 0.86
PDLIM5Q96HC4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
PDLIM5Q96HC4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM5Q96HC4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM5Q96HC4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM5Q96HC4 KRT18P20-201ENST00000548986 1279 ntBASIC20.41■□□□□ 0.86
PDLIM5Q96HC4 AC104187.1-201ENST00000607510 612 ntBASIC20.41■□□□□ 0.86
PDLIM5Q96HC4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM5Q96HC4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM5Q96HC4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM5Q96HC4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PDLIM5Q96HC4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM5Q96HC4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM5Q96HC4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM5Q96HC4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 SLC25A24-204ENST00000569674 2357 ntBASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 AP001160.3-201ENST00000601484 763 ntBASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 AC120498.10-201ENST00000621827 505 ntBASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM5Q96HC4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDLIM5Q96HC4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PDLIM5Q96HC4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDLIM5Q96HC4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.39■□□□□ 0.86
PDLIM5Q96HC4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDLIM5Q96HC4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM5Q96HC4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM5Q96HC4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM5Q96HC4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM5Q96HC4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PDLIM5Q96HC4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM5Q96HC4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM5Q96HC4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM5Q96HC4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.39■□□□□ 0.85
PDLIM5Q96HC4 RARRES2P11-201ENST00000635158 484 ntBASIC20.39■□□□□ 0.85
PDLIM5Q96HC4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.39■□□□□ 0.85
PDLIM5Q96HC4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.39■□□□□ 0.85
PDLIM5Q96HC4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.39■□□□□ 0.85
PDLIM5Q96HC4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM5Q96HC4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms