Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3KBP1Q96B97 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3KBP1Q96B97 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SH3KBP1Q96B97 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SH3KBP1Q96B97 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3KBP1Q96B97 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SH3KBP1Q96B97 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH3KBP1Q96B97 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH3KBP1Q96B97 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH3KBP1Q96B97 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.65■□□□□ 0.9
SH3KBP1Q96B97 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.65■□□□□ 0.9
SH3KBP1Q96B97 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SH3KBP1Q96B97 UBE2DNL-204ENST00000602536 740 ntBASIC20.65■□□□□ 0.9
SH3KBP1Q96B97 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.65■□□□□ 0.9
SH3KBP1Q96B97 MYCNOS-205ENST00000641950 531 ntBASIC20.65■□□□□ 0.9
SH3KBP1Q96B97 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH3KBP1Q96B97 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH3KBP1Q96B97 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SH3KBP1Q96B97 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.64■□□□□ 0.9
SH3KBP1Q96B97 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SH3KBP1Q96B97 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SH3KBP1Q96B97 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.64■□□□□ 0.89
SH3KBP1Q96B97 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH3KBP1Q96B97 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH3KBP1Q96B97 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SH3KBP1Q96B97 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.64■□□□□ 0.89
SH3KBP1Q96B97 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.64■□□□□ 0.89
SH3KBP1Q96B97 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.64■□□□□ 0.89
SH3KBP1Q96B97 MFSD11-216ENST00000590393 1141 ntBASIC20.64■□□□□ 0.89
SH3KBP1Q96B97 AC231657.2-201ENST00000624556 255 ntBASIC20.64■□□□□ 0.89
SH3KBP1Q96B97 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.64■□□□□ 0.89
SH3KBP1Q96B97 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.64■□□□□ 0.89
SH3KBP1Q96B97 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH3KBP1Q96B97 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SH3KBP1Q96B97 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH3KBP1Q96B97 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SH3KBP1Q96B97 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH3KBP1Q96B97 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH3KBP1Q96B97 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH3KBP1Q96B97 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
SH3KBP1Q96B97 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.63■□□□□ 0.89
SH3KBP1Q96B97 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.63■□□□□ 0.89
SH3KBP1Q96B97 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SH3KBP1Q96B97 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH3KBP1Q96B97 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH3KBP1Q96B97 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SH3KBP1Q96B97 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SH3KBP1Q96B97 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH3KBP1Q96B97 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SH3KBP1Q96B97 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.63■□□□□ 0.89
SH3KBP1Q96B97 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SH3KBP1Q96B97 AC026471.6-201ENST00000622954 1905 ntBASIC20.63■□□□□ 0.89
SH3KBP1Q96B97 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 AC006970.2-201ENST00000450065 779 ntBASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 AC008175.2-201ENST00000612840 297 ntBASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 AC120498.10-201ENST00000621827 505 ntBASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SH3KBP1Q96B97 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 SLC7A5P1-201ENST00000568957 537 ntBASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3KBP1Q96B97 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3KBP1Q96B97 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SH3KBP1Q96B97 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms