Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM54Q969K7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM54Q969K7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM54Q969K7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.45■□□□□ 0.54
TMEM54Q969K7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM54Q969K7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM54Q969K7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.45■□□□□ 0.54
TMEM54Q969K7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM54Q969K7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM54Q969K7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM54Q969K7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TMEM54Q969K7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM54Q969K7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM54Q969K7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM54Q969K7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.44■□□□□ 0.54
TMEM54Q969K7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM54Q969K7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.44■□□□□ 0.54
TMEM54Q969K7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TMEM54Q969K7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM54Q969K7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM54Q969K7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.44■□□□□ 0.54
TMEM54Q969K7 KRT18P5-201ENST00000436075 1291 ntBASIC18.44■□□□□ 0.54
TMEM54Q969K7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM54Q969K7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.44■□□□□ 0.54
TMEM54Q969K7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.44■□□□□ 0.54
TMEM54Q969K7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.44■□□□□ 0.54
TMEM54Q969K7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM54Q969K7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TMEM54Q969K7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TMEM54Q969K7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TMEM54Q969K7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TMEM54Q969K7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.43■□□□□ 0.54
TMEM54Q969K7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM54Q969K7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM54Q969K7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.43■□□□□ 0.54
TMEM54Q969K7 SLC7A5P1-201ENST00000568957 537 ntBASIC18.43■□□□□ 0.54
TMEM54Q969K7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TMEM54Q969K7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.43■□□□□ 0.54
TMEM54Q969K7 RARRES2P11-201ENST00000635158 484 ntBASIC18.43■□□□□ 0.54
TMEM54Q969K7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM54Q969K7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM54Q969K7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM54Q969K7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM54Q969K7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM54Q969K7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM54Q969K7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM54Q969K7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM54Q969K7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM54Q969K7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM54Q969K7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM54Q969K7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.42■□□□□ 0.54
TMEM54Q969K7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM54Q969K7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM54Q969K7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM54Q969K7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM54Q969K7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM54Q969K7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM54Q969K7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM54Q969K7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.41■□□□□ 0.54
TMEM54Q969K7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.41■□□□□ 0.54
TMEM54Q969K7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
TMEM54Q969K7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.41■□□□□ 0.54
TMEM54Q969K7 MIR5787-201ENST00000611784 55 ntBASIC18.41■□□□□ 0.54
TMEM54Q969K7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.41■□□□□ 0.54
TMEM54Q969K7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM54Q969K7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TMEM54Q969K7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TMEM54Q969K7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
TMEM54Q969K7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM54Q969K7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM54Q969K7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM54Q969K7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.4■□□□□ 0.54
TMEM54Q969K7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.4■□□□□ 0.54
TMEM54Q969K7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.4■□□□□ 0.54
TMEM54Q969K7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM54Q969K7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.4■□□□□ 0.54
TMEM54Q969K7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM54Q969K7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.4■□□□□ 0.54
TMEM54Q969K7 AC245052.3-201ENST00000450182 901 ntBASIC18.4■□□□□ 0.54
TMEM54Q969K7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.4■□□□□ 0.54
TMEM54Q969K7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.4■□□□□ 0.54
TMEM54Q969K7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM54Q969K7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM54Q969K7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM54Q969K7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM54Q969K7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM54Q969K7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.4■□□□□ 0.54
TMEM54Q969K7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.54
TMEM54Q969K7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.39■□□□□ 0.53
TMEM54Q969K7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
TMEM54Q969K7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM54Q969K7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.39■□□□□ 0.53
TMEM54Q969K7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM54Q969K7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.39■□□□□ 0.53
TMEM54Q969K7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.39■□□□□ 0.53
TMEM54Q969K7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.39■□□□□ 0.53
TMEM54Q969K7 UBE2DNL-204ENST00000602536 740 ntBASIC18.39■□□□□ 0.53
TMEM54Q969K7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM54Q969K7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TMEM54Q969K7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms