Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTP4A1Q93096 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTP4A1Q93096 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PTP4A1Q93096 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
PTP4A1Q93096 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.77■□□□□ 0.6
PTP4A1Q93096 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTP4A1Q93096 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.77■□□□□ 0.6
PTP4A1Q93096 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTP4A1Q93096 AC008764.7-201ENST00000593779 1081 ntBASIC18.77■□□□□ 0.6
PTP4A1Q93096 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTP4A1Q93096 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTP4A1Q93096 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTP4A1Q93096 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTP4A1Q93096 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTP4A1Q93096 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTP4A1Q93096 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PTP4A1Q93096 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PTP4A1Q93096 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTP4A1Q93096 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.76■□□□□ 0.59
PTP4A1Q93096 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PTP4A1Q93096 AC073314.1-201ENST00000568729 2216 ntBASIC18.76■□□□□ 0.59
PTP4A1Q93096 AP005212.1-201ENST00000581547 1997 ntBASIC18.76■□□□□ 0.59
PTP4A1Q93096 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTP4A1Q93096 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.76■□□□□ 0.59
PTP4A1Q93096 AC126544.1-201ENST00000580842 1059 ntBASIC18.76■□□□□ 0.59
PTP4A1Q93096 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTP4A1Q93096 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTP4A1Q93096 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTP4A1Q93096 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTP4A1Q93096 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTP4A1Q93096 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTP4A1Q93096 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PTP4A1Q93096 GABARAPL3-202ENST00000624044 1851 ntBASIC18.75■□□□□ 0.59
PTP4A1Q93096 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.75■□□□□ 0.59
PTP4A1Q93096 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTP4A1Q93096 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PTP4A1Q93096 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTP4A1Q93096 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTP4A1Q93096 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTP4A1Q93096 AC027682.1-201ENST00000562846 899 ntBASIC18.75■□□□□ 0.59
PTP4A1Q93096 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.75■□□□□ 0.59
PTP4A1Q93096 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTP4A1Q93096 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.75■□□□□ 0.59
PTP4A1Q93096 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTP4A1Q93096 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTP4A1Q93096 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTP4A1Q93096 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTP4A1Q93096 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTP4A1Q93096 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
PTP4A1Q93096 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PTP4A1Q93096 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.74■□□□□ 0.59
PTP4A1Q93096 AC055733.4-201ENST00000638462 1354 ntBASIC18.74■□□□□ 0.59
PTP4A1Q93096 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTP4A1Q93096 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.74■□□□□ 0.59
PTP4A1Q93096 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.74■□□□□ 0.59
PTP4A1Q93096 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PTP4A1Q93096 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PTP4A1Q93096 AC009237.3-201ENST00000393279 1427 ntBASIC18.74■□□□□ 0.59
PTP4A1Q93096 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTP4A1Q93096 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTP4A1Q93096 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PTP4A1Q93096 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTP4A1Q93096 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTP4A1Q93096 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
PTP4A1Q93096 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
PTP4A1Q93096 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PTP4A1Q93096 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PTP4A1Q93096 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTP4A1Q93096 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PTP4A1Q93096 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTP4A1Q93096 RASA4CP-201ENST00000424092 1398 ntBASIC18.73■□□□□ 0.59
PTP4A1Q93096 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTP4A1Q93096 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTP4A1Q93096 AC099791.1-201ENST00000416440 715 ntBASIC18.73■□□□□ 0.59
PTP4A1Q93096 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTP4A1Q93096 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.73■□□□□ 0.59
PTP4A1Q93096 AL031432.3-201ENST00000607698 485 ntBASIC18.73■□□□□ 0.59
PTP4A1Q93096 AC005837.3-201ENST00000612163 286 ntBASIC18.73■□□□□ 0.59
PTP4A1Q93096 AL136967.2-201ENST00000623968 743 ntBASIC18.73■□□□□ 0.59
PTP4A1Q93096 AC121338.2-201ENST00000622535 1744 ntBASIC18.73■□□□□ 0.59
PTP4A1Q93096 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.73■□□□□ 0.59
PTP4A1Q93096 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTP4A1Q93096 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTP4A1Q93096 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTP4A1Q93096 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
PTP4A1Q93096 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTP4A1Q93096 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
PTP4A1Q93096 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTP4A1Q93096 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTP4A1Q93096 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.72■□□□□ 0.59
PTP4A1Q93096 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTP4A1Q93096 MIR939-201ENST00000401314 82 ntBASIC18.72■□□□□ 0.59
PTP4A1Q93096 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PTP4A1Q93096 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
PTP4A1Q93096 SUDS3P1-201ENST00000505831 966 ntBASIC18.72■□□□□ 0.59
PTP4A1Q93096 AP001330.3-201ENST00000520123 633 ntBASIC18.72■□□□□ 0.59
PTP4A1Q93096 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.72■□□□□ 0.59
PTP4A1Q93096 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTP4A1Q93096 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTP4A1Q93096 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms