Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CCDC92B-201ENST00000575506 885 ntBASIC22.29■■□□□ 1.16
DDX1Q92499 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
DDX1Q92499 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.29■■□□□ 1.16
DDX1Q92499 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.29■■□□□ 1.16
DDX1Q92499 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
DDX1Q92499 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.29■■□□□ 1.16
DDX1Q92499 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
DDX1Q92499 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.28■■□□□ 1.16
DDX1Q92499 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
DDX1Q92499 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
DDX1Q92499 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DDX1Q92499 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.28■■□□□ 1.16
DDX1Q92499 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.28■■□□□ 1.16
DDX1Q92499 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DDX1Q92499 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.28■■□□□ 1.16
DDX1Q92499 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
DDX1Q92499 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.27■■□□□ 1.16
DDX1Q92499 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX1Q92499 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX1Q92499 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.27■■□□□ 1.16
DDX1Q92499 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
DDX1Q92499 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
DDX1Q92499 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
DDX1Q92499 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.27■■□□□ 1.16
DDX1Q92499 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.27■■□□□ 1.16
DDX1Q92499 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.27■■□□□ 1.16
DDX1Q92499 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.27■■□□□ 1.16
DDX1Q92499 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.27■■□□□ 1.16
DDX1Q92499 AC138907.5-202ENST00000569484 235 ntBASIC22.27■■□□□ 1.16
DDX1Q92499 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
DDX1Q92499 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX1Q92499 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
DDX1Q92499 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.27■■□□□ 1.16
DDX1Q92499 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX1Q92499 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.27■■□□□ 1.15
DDX1Q92499 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX1Q92499 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX1Q92499 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX1Q92499 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.26■■□□□ 1.15
DDX1Q92499 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.26■■□□□ 1.15
DDX1Q92499 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.26■■□□□ 1.15
DDX1Q92499 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX1Q92499 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX1Q92499 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
DDX1Q92499 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.26■■□□□ 1.15
DDX1Q92499 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.26■■□□□ 1.15
DDX1Q92499 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX1Q92499 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX1Q92499 AC080038.1-201ENST00000611274 1154 ntBASIC22.26■■□□□ 1.15
DDX1Q92499 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.26■■□□□ 1.15
DDX1Q92499 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX1Q92499 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX1Q92499 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
DDX1Q92499 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX1Q92499 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.26■■□□□ 1.15
DDX1Q92499 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX1Q92499 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.26■■□□□ 1.15
DDX1Q92499 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.26■■□□□ 1.15
DDX1Q92499 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX1Q92499 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX1Q92499 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX1Q92499 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DDX1Q92499 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX1Q92499 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX1Q92499 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX1Q92499 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX1Q92499 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX1Q92499 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
DDX1Q92499 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.25■■□□□ 1.15
DDX1Q92499 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DDX1Q92499 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.25■■□□□ 1.15
DDX1Q92499 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX1Q92499 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.25■■□□□ 1.15
DDX1Q92499 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
DDX1Q92499 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DDX1Q92499 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DDX1Q92499 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
DDX1Q92499 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
DDX1Q92499 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX1Q92499 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX1Q92499 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX1Q92499 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX1Q92499 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
DDX1Q92499 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX1Q92499 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.24■■□□□ 1.15
DDX1Q92499 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.24■■□□□ 1.15
DDX1Q92499 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.24■■□□□ 1.15
DDX1Q92499 KRT18P14-201ENST00000534205 1250 ntBASIC22.24■■□□□ 1.15
DDX1Q92499 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DDX1Q92499 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.24■■□□□ 1.15
DDX1Q92499 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX1Q92499 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DDX1Q92499 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.24■■□□□ 1.15
DDX1Q92499 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
DDX1Q92499 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.24■■□□□ 1.15
DDX1Q92499 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX1Q92499 PLK5-205ENST00000642079 1969 ntBASIC22.23■■□□□ 1.15
DDX1Q92499 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX1Q92499 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX1Q92499 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms