Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RTL9Q8NET4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC25.87■■□□□ 1.73
RTL9Q8NET4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC25.87■■□□□ 1.73
RTL9Q8NET4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC25.87■■□□□ 1.73
RTL9Q8NET4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC25.87■■□□□ 1.73
RTL9Q8NET4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
RTL9Q8NET4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC25.87■■□□□ 1.73
RTL9Q8NET4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RTL9Q8NET4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC25.87■■□□□ 1.73
RTL9Q8NET4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RTL9Q8NET4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RTL9Q8NET4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC25.87■■□□□ 1.73
RTL9Q8NET4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RTL9Q8NET4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RTL9Q8NET4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RTL9Q8NET4 CDV3P1-201ENST00000471403 739 ntBASIC25.86■■□□□ 1.73
RTL9Q8NET4 AC097658.1-201ENST00000475555 843 ntBASIC25.86■■□□□ 1.73
RTL9Q8NET4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RTL9Q8NET4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.86■■□□□ 1.73
RTL9Q8NET4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
RTL9Q8NET4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RTL9Q8NET4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RTL9Q8NET4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RTL9Q8NET4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RTL9Q8NET4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC25.85■■□□□ 1.73
RTL9Q8NET4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC25.85■■□□□ 1.73
RTL9Q8NET4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RTL9Q8NET4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RTL9Q8NET4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
RTL9Q8NET4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RTL9Q8NET4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC25.85■■□□□ 1.73
RTL9Q8NET4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RTL9Q8NET4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC25.85■■□□□ 1.73
RTL9Q8NET4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC25.85■■□□□ 1.73
RTL9Q8NET4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC25.85■■□□□ 1.73
RTL9Q8NET4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC25.85■■□□□ 1.73
RTL9Q8NET4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
RTL9Q8NET4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25.85■■□□□ 1.73
RTL9Q8NET4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RTL9Q8NET4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RTL9Q8NET4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
RTL9Q8NET4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RTL9Q8NET4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.84■■□□□ 1.73
RTL9Q8NET4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RTL9Q8NET4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RTL9Q8NET4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC25.84■■□□□ 1.73
RTL9Q8NET4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC25.84■■□□□ 1.73
RTL9Q8NET4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
RTL9Q8NET4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RTL9Q8NET4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.84■■□□□ 1.73
RTL9Q8NET4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
RTL9Q8NET4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RTL9Q8NET4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
RTL9Q8NET4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RTL9Q8NET4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
RTL9Q8NET4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.84■■□□□ 1.73
RTL9Q8NET4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RTL9Q8NET4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RTL9Q8NET4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
RTL9Q8NET4 CYP2T3P-201ENST00000601990 817 ntBASIC25.83■■□□□ 1.73
RTL9Q8NET4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
RTL9Q8NET4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC25.83■■□□□ 1.73
RTL9Q8NET4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
RTL9Q8NET4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
RTL9Q8NET4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.72
RTL9Q8NET4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.83■■□□□ 1.72
RTL9Q8NET4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RTL9Q8NET4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC25.82■■□□□ 1.72
RTL9Q8NET4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RTL9Q8NET4 KRT17P1-201ENST00000399211 1546 ntBASIC25.82■■□□□ 1.72
RTL9Q8NET4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
RTL9Q8NET4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RTL9Q8NET4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RTL9Q8NET4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
RTL9Q8NET4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RTL9Q8NET4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
RTL9Q8NET4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RTL9Q8NET4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
RTL9Q8NET4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC25.82■■□□□ 1.72
RTL9Q8NET4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
RTL9Q8NET4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RTL9Q8NET4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
RTL9Q8NET4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC25.82■■□□□ 1.72
RTL9Q8NET4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
RTL9Q8NET4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RTL9Q8NET4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC25.81■■□□□ 1.72
RTL9Q8NET4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RTL9Q8NET4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RTL9Q8NET4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC25.81■■□□□ 1.72
RTL9Q8NET4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
RTL9Q8NET4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC25.81■■□□□ 1.72
RTL9Q8NET4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC25.81■■□□□ 1.72
RTL9Q8NET4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RTL9Q8NET4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RTL9Q8NET4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RTL9Q8NET4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC25.8■■□□□ 1.72
RTL9Q8NET4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC25.8■■□□□ 1.72
RTL9Q8NET4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC25.8■■□□□ 1.72
RTL9Q8NET4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RTL9Q8NET4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms