Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
ABCA6Q8N139 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
ABCA6Q8N139 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
ABCA6Q8N139 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC31.37■■■□□ 2.61
ABCA6Q8N139 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
ABCA6Q8N139 ISG20-202ENST00000379224 540 ntTSL 3 BASIC31.37■■■□□ 2.61
ABCA6Q8N139 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
ABCA6Q8N139 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC31.37■■■□□ 2.61
ABCA6Q8N139 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC31.37■■■□□ 2.61
ABCA6Q8N139 AC105020.6-201ENST00000621523 1217 ntBASIC31.37■■■□□ 2.61
ABCA6Q8N139 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC31.37■■■□□ 2.61
ABCA6Q8N139 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
ABCA6Q8N139 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
ABCA6Q8N139 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC31.36■■■□□ 2.61
ABCA6Q8N139 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
ABCA6Q8N139 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC31.36■■■□□ 2.61
ABCA6Q8N139 AC003102.1-202ENST00000563394 1796 ntBASIC31.36■■■□□ 2.61
ABCA6Q8N139 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
ABCA6Q8N139 AC139530.1-201ENST00000575312 1977 ntBASIC31.35■■■□□ 2.61
ABCA6Q8N139 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
ABCA6Q8N139 VMO1-204ENST00000441199 741 ntTSL 2 BASIC31.35■■■□□ 2.61
ABCA6Q8N139 AC245052.3-201ENST00000450182 901 ntBASIC31.35■■■□□ 2.61
ABCA6Q8N139 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC31.35■■■□□ 2.61
ABCA6Q8N139 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC31.35■■■□□ 2.61
ABCA6Q8N139 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ABCA6Q8N139 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ABCA6Q8N139 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
ABCA6Q8N139 RPS2P55-201ENST00000397318 883 ntBASIC31.35■■■□□ 2.61
ABCA6Q8N139 CDV3P1-201ENST00000471403 739 ntBASIC31.35■■■□□ 2.61
ABCA6Q8N139 AC107956.1-201ENST00000494359 873 ntBASIC31.35■■■□□ 2.61
ABCA6Q8N139 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
ABCA6Q8N139 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
ABCA6Q8N139 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
ABCA6Q8N139 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
ABCA6Q8N139 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC31.34■■■□□ 2.61
ABCA6Q8N139 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
ABCA6Q8N139 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
ABCA6Q8N139 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC31.34■■■□□ 2.61
ABCA6Q8N139 GCK-205ENST00000437084 1385 ntTSL 5 BASIC31.34■■■□□ 2.61
ABCA6Q8N139 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ABCA6Q8N139 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
ABCA6Q8N139 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ABCA6Q8N139 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ABCA6Q8N139 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ABCA6Q8N139 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
ABCA6Q8N139 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ABCA6Q8N139 RCN1P1-201ENST00000400413 996 ntBASIC31.33■■■□□ 2.61
ABCA6Q8N139 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC31.33■■■□□ 2.61
ABCA6Q8N139 ABHD17AP6-201ENST00000458502 1044 ntBASIC31.33■■■□□ 2.61
ABCA6Q8N139 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ABCA6Q8N139 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
ABCA6Q8N139 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC31.33■■■□□ 2.61
ABCA6Q8N139 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ABCA6Q8N139 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
ABCA6Q8N139 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
ABCA6Q8N139 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC31.32■■■□□ 2.6
ABCA6Q8N139 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
ABCA6Q8N139 AC012306.2-201ENST00000609350 630 ntBASIC31.32■■■□□ 2.6
ABCA6Q8N139 AC124016.1-201ENST00000609552 612 ntBASIC31.32■■■□□ 2.6
ABCA6Q8N139 REXO1L12P-201ENST00000622156 912 ntBASIC31.32■■■□□ 2.6
ABCA6Q8N139 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
ABCA6Q8N139 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ABCA6Q8N139 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
ABCA6Q8N139 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC31.32■■■□□ 2.6
ABCA6Q8N139 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
ABCA6Q8N139 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
ABCA6Q8N139 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
ABCA6Q8N139 AC087499.1-201ENST00000418141 1075 ntBASIC31.31■■■□□ 2.6
ABCA6Q8N139 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
ABCA6Q8N139 PPOX-219ENST00000544598 813 ntTSL 2 BASIC31.31■■■□□ 2.6
ABCA6Q8N139 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
ABCA6Q8N139 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
ABCA6Q8N139 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC31.31■■■□□ 2.6
ABCA6Q8N139 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
ABCA6Q8N139 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
ABCA6Q8N139 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
ABCA6Q8N139 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC31.31■■■□□ 2.6
ABCA6Q8N139 AL355075.4-201ENST00000554988 638 ntBASIC31.31■■■□□ 2.6
ABCA6Q8N139 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
ABCA6Q8N139 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ABCA6Q8N139 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
ABCA6Q8N139 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ABCA6Q8N139 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ABCA6Q8N139 MFF-205ENST00000354503 1085 ntTSL 2 BASIC31.3■■■□□ 2.6
ABCA6Q8N139 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC31.3■■■□□ 2.6
ABCA6Q8N139 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC31.3■■■□□ 2.6
ABCA6Q8N139 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
ABCA6Q8N139 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ABCA6Q8N139 REXO2-208ENST00000539754 791 ntTSL 2 BASIC31.3■■■□□ 2.6
ABCA6Q8N139 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ABCA6Q8N139 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ABCA6Q8N139 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC31.29■■■□□ 2.6
ABCA6Q8N139 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC31.29■■■□□ 2.6
ABCA6Q8N139 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ABCA6Q8N139 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
ABCA6Q8N139 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC31.29■■■□□ 2.6
ABCA6Q8N139 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ABCA6Q8N139 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC31.29■■■□□ 2.6
ABCA6Q8N139 AL049637.2-201ENST00000641778 930 ntBASIC31.29■■■□□ 2.6
ABCA6Q8N139 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms