Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC25.95■■□□□ 1.74
SMC5Q8IY18 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
SMC5Q8IY18 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SMC5Q8IY18 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC25.94■■□□□ 1.74
SMC5Q8IY18 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
SMC5Q8IY18 ME2-216ENST00000639850 2331 ntTSL 5 BASIC25.94■■□□□ 1.74
SMC5Q8IY18 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC25.94■■□□□ 1.74
SMC5Q8IY18 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
SMC5Q8IY18 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
SMC5Q8IY18 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SMC5Q8IY18 KRT87P-202ENST00000534226 1464 ntBASIC25.94■■□□□ 1.74
SMC5Q8IY18 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC25.94■■□□□ 1.74
SMC5Q8IY18 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
SMC5Q8IY18 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC25.94■■□□□ 1.74
SMC5Q8IY18 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC25.94■■□□□ 1.74
SMC5Q8IY18 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SMC5Q8IY18 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
SMC5Q8IY18 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC25.94■■□□□ 1.74
SMC5Q8IY18 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SMC5Q8IY18 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SMC5Q8IY18 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.93■■□□□ 1.74
SMC5Q8IY18 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
SMC5Q8IY18 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SMC5Q8IY18 LINC01006-201ENST00000333319 2292 ntBASIC25.93■■□□□ 1.74
SMC5Q8IY18 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.92■■□□□ 1.74
SMC5Q8IY18 AP004607.4-201ENST00000530158 1459 ntBASIC25.92■■□□□ 1.74
SMC5Q8IY18 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
SMC5Q8IY18 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
SMC5Q8IY18 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SMC5Q8IY18 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SMC5Q8IY18 AC079140.4-201ENST00000507448 529 ntBASIC25.92■■□□□ 1.74
SMC5Q8IY18 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC25.92■■□□□ 1.74
SMC5Q8IY18 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC25.92■■□□□ 1.74
SMC5Q8IY18 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
SMC5Q8IY18 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SMC5Q8IY18 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMC5Q8IY18 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
SMC5Q8IY18 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMC5Q8IY18 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMC5Q8IY18 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMC5Q8IY18 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SMC5Q8IY18 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SMC5Q8IY18 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC25.91■■□□□ 1.74
SMC5Q8IY18 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMC5Q8IY18 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC25.91■■□□□ 1.74
SMC5Q8IY18 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SMC5Q8IY18 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC25.91■■□□□ 1.74
SMC5Q8IY18 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SMC5Q8IY18 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25.9■■□□□ 1.74
SMC5Q8IY18 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SMC5Q8IY18 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC25.9■■□□□ 1.74
SMC5Q8IY18 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SMC5Q8IY18 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.9■■□□□ 1.74
SMC5Q8IY18 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SMC5Q8IY18 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
SMC5Q8IY18 AC138907.5-202ENST00000569484 235 ntBASIC25.9■■□□□ 1.74
SMC5Q8IY18 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SMC5Q8IY18 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
SMC5Q8IY18 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SMC5Q8IY18 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC25.89■■□□□ 1.74
SMC5Q8IY18 AP005212.1-201ENST00000581547 1997 ntBASIC25.89■■□□□ 1.74
SMC5Q8IY18 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SMC5Q8IY18 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC25.89■■□□□ 1.74
SMC5Q8IY18 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SMC5Q8IY18 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC25.89■■□□□ 1.74
SMC5Q8IY18 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.89■■□□□ 1.74
SMC5Q8IY18 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SMC5Q8IY18 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
SMC5Q8IY18 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SMC5Q8IY18 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SMC5Q8IY18 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SMC5Q8IY18 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
SMC5Q8IY18 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
SMC5Q8IY18 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.88■■□□□ 1.73
SMC5Q8IY18 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
SMC5Q8IY18 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SMC5Q8IY18 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SMC5Q8IY18 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SMC5Q8IY18 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SMC5Q8IY18 AC073314.1-201ENST00000568729 2216 ntBASIC25.87■■□□□ 1.73
SMC5Q8IY18 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SMC5Q8IY18 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
SMC5Q8IY18 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
SMC5Q8IY18 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
SMC5Q8IY18 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMC5Q8IY18 POU5F1P4-201ENST00000413175 1085 ntBASIC25.87■■□□□ 1.73
SMC5Q8IY18 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC25.87■■□□□ 1.73
SMC5Q8IY18 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.87■■□□□ 1.73
SMC5Q8IY18 SERP1-208ENST00000491660 830 ntTSL 2 BASIC25.87■■□□□ 1.73
SMC5Q8IY18 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC25.87■■□□□ 1.73
SMC5Q8IY18 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMC5Q8IY18 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.87■■□□□ 1.73
SMC5Q8IY18 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
SMC5Q8IY18 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMC5Q8IY18 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC25.86■■□□□ 1.73
SMC5Q8IY18 LINC02228-203ENST00000641970 1355 ntBASIC25.86■■□□□ 1.73
SMC5Q8IY18 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SMC5Q8IY18 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SMC5Q8IY18 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
SMC5Q8IY18 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms