Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APLFQ8IW19 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.59■□□□□ 0.89
APLFQ8IW19 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APLFQ8IW19 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
APLFQ8IW19 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.59■□□□□ 0.89
APLFQ8IW19 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APLFQ8IW19 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.59■□□□□ 0.89
APLFQ8IW19 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
APLFQ8IW19 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APLFQ8IW19 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
APLFQ8IW19 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APLFQ8IW19 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.59■□□□□ 0.89
APLFQ8IW19 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APLFQ8IW19 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.59■□□□□ 0.89
APLFQ8IW19 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.59■□□□□ 0.89
APLFQ8IW19 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.59■□□□□ 0.89
APLFQ8IW19 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APLFQ8IW19 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
APLFQ8IW19 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APLFQ8IW19 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
APLFQ8IW19 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
APLFQ8IW19 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
APLFQ8IW19 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
APLFQ8IW19 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
APLFQ8IW19 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.58■□□□□ 0.89
APLFQ8IW19 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
APLFQ8IW19 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
APLFQ8IW19 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
APLFQ8IW19 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.58■□□□□ 0.89
APLFQ8IW19 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
APLFQ8IW19 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.58■□□□□ 0.89
APLFQ8IW19 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.58■□□□□ 0.89
APLFQ8IW19 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
APLFQ8IW19 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.58■□□□□ 0.89
APLFQ8IW19 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
APLFQ8IW19 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.58■□□□□ 0.88
APLFQ8IW19 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
APLFQ8IW19 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.58■□□□□ 0.88
APLFQ8IW19 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
APLFQ8IW19 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.58■□□□□ 0.88
APLFQ8IW19 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
APLFQ8IW19 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.57■□□□□ 0.88
APLFQ8IW19 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APLFQ8IW19 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.57■□□□□ 0.88
APLFQ8IW19 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APLFQ8IW19 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APLFQ8IW19 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
APLFQ8IW19 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APLFQ8IW19 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
APLFQ8IW19 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.57■□□□□ 0.88
APLFQ8IW19 LINC01529-204ENST00000636474 1715 ntBASIC20.57■□□□□ 0.88
APLFQ8IW19 AC105233.4-201ENST00000642045 216 ntBASIC20.57■□□□□ 0.88
APLFQ8IW19 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.57■□□□□ 0.88
APLFQ8IW19 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
APLFQ8IW19 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
APLFQ8IW19 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
APLFQ8IW19 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
APLFQ8IW19 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
APLFQ8IW19 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APLFQ8IW19 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.57■□□□□ 0.88
APLFQ8IW19 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APLFQ8IW19 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
APLFQ8IW19 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.56■□□□□ 0.88
APLFQ8IW19 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APLFQ8IW19 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
APLFQ8IW19 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.56■□□□□ 0.88
APLFQ8IW19 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.56■□□□□ 0.88
APLFQ8IW19 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
APLFQ8IW19 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APLFQ8IW19 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
APLFQ8IW19 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
APLFQ8IW19 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.56■□□□□ 0.88
APLFQ8IW19 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
APLFQ8IW19 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APLFQ8IW19 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
APLFQ8IW19 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.56■□□□□ 0.88
APLFQ8IW19 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.56■□□□□ 0.88
APLFQ8IW19 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
APLFQ8IW19 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APLFQ8IW19 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
APLFQ8IW19 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
APLFQ8IW19 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
APLFQ8IW19 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APLFQ8IW19 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APLFQ8IW19 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APLFQ8IW19 AC144652.1-201ENST00000609974 1624 ntBASIC20.56■□□□□ 0.88
APLFQ8IW19 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.56■□□□□ 0.88
APLFQ8IW19 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.56■□□□□ 0.88
APLFQ8IW19 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
APLFQ8IW19 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.55■□□□□ 0.88
APLFQ8IW19 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
APLFQ8IW19 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
APLFQ8IW19 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
APLFQ8IW19 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
APLFQ8IW19 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.55■□□□□ 0.88
APLFQ8IW19 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
APLFQ8IW19 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
APLFQ8IW19 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.55■□□□□ 0.88
APLFQ8IW19 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.55■□□□□ 0.88
APLFQ8IW19 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms