Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC71Q8IV32 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC71Q8IV32 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC71Q8IV32 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC71Q8IV32 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC71Q8IV32 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC71Q8IV32 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC71Q8IV32 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.55■□□□□ 0.72
CCDC71Q8IV32 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC71Q8IV32 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC71Q8IV32 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC71Q8IV32 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC71Q8IV32 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC71Q8IV32 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC71Q8IV32 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC71Q8IV32 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC71Q8IV32 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC71Q8IV32 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC71Q8IV32 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.55■□□□□ 0.72
CCDC71Q8IV32 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC71Q8IV32 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC71Q8IV32 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
CCDC71Q8IV32 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC71Q8IV32 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC71Q8IV32 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC71Q8IV32 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC71Q8IV32 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC71Q8IV32 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC71Q8IV32 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC71Q8IV32 FEM1AP1-201ENST00000431297 1995 ntBASIC19.54■□□□□ 0.72
CCDC71Q8IV32 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC71Q8IV32 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC71Q8IV32 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.54■□□□□ 0.72
CCDC71Q8IV32 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC71Q8IV32 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC71Q8IV32 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC71Q8IV32 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC71Q8IV32 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC71Q8IV32 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC71Q8IV32 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC71Q8IV32 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC71Q8IV32 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC71Q8IV32 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC71Q8IV32 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC71Q8IV32 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC71Q8IV32 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC71Q8IV32 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.53■□□□□ 0.72
CCDC71Q8IV32 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC71Q8IV32 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC71Q8IV32 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC71Q8IV32 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC71Q8IV32 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC71Q8IV32 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC71Q8IV32 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC71Q8IV32 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.52■□□□□ 0.72
CCDC71Q8IV32 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC71Q8IV32 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC71Q8IV32 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CCDC71Q8IV32 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC71Q8IV32 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC71Q8IV32 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
CCDC71Q8IV32 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC71Q8IV32 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.52■□□□□ 0.71
CCDC71Q8IV32 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC71Q8IV32 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC71Q8IV32 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC71Q8IV32 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC71Q8IV32 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.51■□□□□ 0.71
CCDC71Q8IV32 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC71Q8IV32 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CCDC71Q8IV32 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC71Q8IV32 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC71Q8IV32 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC71Q8IV32 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC71Q8IV32 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC71Q8IV32 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC71Q8IV32 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC71Q8IV32 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC71Q8IV32 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC71Q8IV32 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
CCDC71Q8IV32 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC71Q8IV32 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC71Q8IV32 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC71Q8IV32 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC71Q8IV32 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC71Q8IV32 ID1-201ENST00000376105 1233 ntBASIC19.5■□□□□ 0.71
CCDC71Q8IV32 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.5■□□□□ 0.71
CCDC71Q8IV32 KRT18P61-201ENST00000585825 1298 ntBASIC19.5■□□□□ 0.71
CCDC71Q8IV32 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC71Q8IV32 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC71Q8IV32 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC71Q8IV32 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC71Q8IV32 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC71Q8IV32 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC71Q8IV32 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC71Q8IV32 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCDC71Q8IV32 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC71Q8IV32 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC71Q8IV32 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC71Q8IV32 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms