Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF135Q8IUD6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF135Q8IUD6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RNF135Q8IUD6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
RNF135Q8IUD6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RNF135Q8IUD6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.14■■□□□ 1.14
RNF135Q8IUD6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RNF135Q8IUD6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.14■■□□□ 1.14
RNF135Q8IUD6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.14■■□□□ 1.13
RNF135Q8IUD6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.14■■□□□ 1.13
RNF135Q8IUD6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
RNF135Q8IUD6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
RNF135Q8IUD6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.14■■□□□ 1.13
RNF135Q8IUD6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.14■■□□□ 1.13
RNF135Q8IUD6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.14■■□□□ 1.13
RNF135Q8IUD6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.14■■□□□ 1.13
RNF135Q8IUD6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.14■■□□□ 1.13
RNF135Q8IUD6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF135Q8IUD6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.14■■□□□ 1.13
RNF135Q8IUD6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF135Q8IUD6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF135Q8IUD6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RNF135Q8IUD6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RNF135Q8IUD6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.14■■□□□ 1.13
RNF135Q8IUD6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RNF135Q8IUD6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RNF135Q8IUD6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
RNF135Q8IUD6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.13■■□□□ 1.13
RNF135Q8IUD6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RNF135Q8IUD6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF135Q8IUD6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
RNF135Q8IUD6 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.13■■□□□ 1.13
RNF135Q8IUD6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.13■■□□□ 1.13
RNF135Q8IUD6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.13■■□□□ 1.13
RNF135Q8IUD6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF135Q8IUD6 REXO1L12P-201ENST00000622156 912 ntBASIC22.13■■□□□ 1.13
RNF135Q8IUD6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF135Q8IUD6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.13■■□□□ 1.13
RNF135Q8IUD6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
RNF135Q8IUD6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.12■■□□□ 1.13
RNF135Q8IUD6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
RNF135Q8IUD6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF135Q8IUD6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF135Q8IUD6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RNF135Q8IUD6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RNF135Q8IUD6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RNF135Q8IUD6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RNF135Q8IUD6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF135Q8IUD6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.12■■□□□ 1.13
RNF135Q8IUD6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.12■■□□□ 1.13
RNF135Q8IUD6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RNF135Q8IUD6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.12■■□□□ 1.13
RNF135Q8IUD6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF135Q8IUD6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF135Q8IUD6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RNF135Q8IUD6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RNF135Q8IUD6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF135Q8IUD6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
RNF135Q8IUD6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF135Q8IUD6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF135Q8IUD6 EP400NL-214ENST00000641289 2402 ntBASIC22.11■■□□□ 1.13
RNF135Q8IUD6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF135Q8IUD6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF135Q8IUD6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF135Q8IUD6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RNF135Q8IUD6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF135Q8IUD6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF135Q8IUD6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
RNF135Q8IUD6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.11■■□□□ 1.13
RNF135Q8IUD6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.11■■□□□ 1.13
RNF135Q8IUD6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RNF135Q8IUD6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF135Q8IUD6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF135Q8IUD6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
RNF135Q8IUD6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
RNF135Q8IUD6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF135Q8IUD6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF135Q8IUD6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF135Q8IUD6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF135Q8IUD6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RNF135Q8IUD6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.1■■□□□ 1.13
RNF135Q8IUD6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RNF135Q8IUD6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.1■■□□□ 1.13
RNF135Q8IUD6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.1■■□□□ 1.13
RNF135Q8IUD6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF135Q8IUD6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RNF135Q8IUD6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
RNF135Q8IUD6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.09■■□□□ 1.13
RNF135Q8IUD6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF135Q8IUD6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF135Q8IUD6 AC010980.2-201ENST00000587099 1412 ntBASIC22.09■■□□□ 1.13
RNF135Q8IUD6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF135Q8IUD6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF135Q8IUD6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF135Q8IUD6 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.09■■□□□ 1.13
RNF135Q8IUD6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.09■■□□□ 1.13
RNF135Q8IUD6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.09■■□□□ 1.13
RNF135Q8IUD6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.09■■□□□ 1.13
RNF135Q8IUD6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.09■■□□□ 1.13
RNF135Q8IUD6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms