Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
C12orf40Q86WS4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.37■■□□□ 1.01
C12orf40Q86WS4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
C12orf40Q86WS4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.36■■□□□ 1.01
C12orf40Q86WS4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
C12orf40Q86WS4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
C12orf40Q86WS4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
C12orf40Q86WS4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.36■■□□□ 1.01
C12orf40Q86WS4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.36■■□□□ 1.01
C12orf40Q86WS4 AC097658.1-201ENST00000475555 843 ntBASIC21.36■■□□□ 1.01
C12orf40Q86WS4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.36■■□□□ 1.01
C12orf40Q86WS4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.36■■□□□ 1.01
C12orf40Q86WS4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.36■■□□□ 1.01
C12orf40Q86WS4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
C12orf40Q86WS4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
C12orf40Q86WS4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
C12orf40Q86WS4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
C12orf40Q86WS4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
C12orf40Q86WS4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
C12orf40Q86WS4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
C12orf40Q86WS4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.36■■□□□ 1.01
C12orf40Q86WS4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
C12orf40Q86WS4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
C12orf40Q86WS4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.35■■□□□ 1.01
C12orf40Q86WS4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
C12orf40Q86WS4 KRT17P1-201ENST00000399211 1546 ntBASIC21.35■■□□□ 1.01
C12orf40Q86WS4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
C12orf40Q86WS4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
C12orf40Q86WS4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
C12orf40Q86WS4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.35■■□□□ 1.01
C12orf40Q86WS4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.35■■□□□ 1.01
C12orf40Q86WS4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.35■■□□□ 1.01
C12orf40Q86WS4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
C12orf40Q86WS4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.35■■□□□ 1.01
C12orf40Q86WS4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
C12orf40Q86WS4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
C12orf40Q86WS4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.34■■□□□ 1.01
C12orf40Q86WS4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
C12orf40Q86WS4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
C12orf40Q86WS4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
C12orf40Q86WS4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.34■■□□□ 1.01
C12orf40Q86WS4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.34■■□□□ 1.01
C12orf40Q86WS4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
C12orf40Q86WS4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
C12orf40Q86WS4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.34■■□□□ 1.01
C12orf40Q86WS4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.34■■□□□ 1.01
C12orf40Q86WS4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
C12orf40Q86WS4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.34■■□□□ 1.01
C12orf40Q86WS4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
C12orf40Q86WS4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
C12orf40Q86WS4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
C12orf40Q86WS4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
C12orf40Q86WS4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.33■■□□□ 1.01
C12orf40Q86WS4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
C12orf40Q86WS4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
C12orf40Q86WS4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
C12orf40Q86WS4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.33■■□□□ 1.01
C12orf40Q86WS4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
C12orf40Q86WS4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.33■■□□□ 1.01
C12orf40Q86WS4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.33■■□□□ 1.01
C12orf40Q86WS4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.33■■□□□ 1.01
C12orf40Q86WS4 FAM21FP-204ENST00000608637 956 ntBASIC21.33■■□□□ 1.01
C12orf40Q86WS4 ITM2C-210ENST00000620962 501 ntBASIC21.33■■□□□ 1.01
C12orf40Q86WS4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
C12orf40Q86WS4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
C12orf40Q86WS4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
C12orf40Q86WS4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
C12orf40Q86WS4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.32■■□□□ 1
C12orf40Q86WS4 PRORSD1P-201ENST00000295112 541 ntBASIC21.32■■□□□ 1
C12orf40Q86WS4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
C12orf40Q86WS4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.32■■□□□ 1
C12orf40Q86WS4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.32■■□□□ 1
C12orf40Q86WS4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.32■■□□□ 1
C12orf40Q86WS4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.32■■□□□ 1
C12orf40Q86WS4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
C12orf40Q86WS4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.32■■□□□ 1
C12orf40Q86WS4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.32■■□□□ 1
C12orf40Q86WS4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
C12orf40Q86WS4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
C12orf40Q86WS4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.32■■□□□ 1
C12orf40Q86WS4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
C12orf40Q86WS4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
C12orf40Q86WS4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
C12orf40Q86WS4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.31■■□□□ 1
C12orf40Q86WS4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
C12orf40Q86WS4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.31■■□□□ 1
C12orf40Q86WS4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.31■■□□□ 1
C12orf40Q86WS4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
C12orf40Q86WS4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.31■■□□□ 1
C12orf40Q86WS4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.31■■□□□ 1
C12orf40Q86WS4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.31■■□□□ 1
C12orf40Q86WS4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
C12orf40Q86WS4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.31■■□□□ 1
C12orf40Q86WS4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
C12orf40Q86WS4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
C12orf40Q86WS4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
C12orf40Q86WS4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
C12orf40Q86WS4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
C12orf40Q86WS4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.3■■□□□ 1
C12orf40Q86WS4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms