Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.94■□□□□ 0.46
RAI1Q7Z5J4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.94■□□□□ 0.46
RAI1Q7Z5J4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.94■□□□□ 0.46
RAI1Q7Z5J4 AC010542.4-201ENST00000563151 1910 ntBASIC17.94■□□□□ 0.46
RAI1Q7Z5J4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RAI1Q7Z5J4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAI1Q7Z5J4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAI1Q7Z5J4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.94■□□□□ 0.46
RAI1Q7Z5J4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAI1Q7Z5J4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.94■□□□□ 0.46
RAI1Q7Z5J4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
RAI1Q7Z5J4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAI1Q7Z5J4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAI1Q7Z5J4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.94■□□□□ 0.46
RAI1Q7Z5J4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.94■□□□□ 0.46
RAI1Q7Z5J4 AC097658.1-201ENST00000475555 843 ntBASIC17.94■□□□□ 0.46
RAI1Q7Z5J4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAI1Q7Z5J4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.94■□□□□ 0.46
RAI1Q7Z5J4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RAI1Q7Z5J4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAI1Q7Z5J4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAI1Q7Z5J4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAI1Q7Z5J4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAI1Q7Z5J4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.93■□□□□ 0.46
RAI1Q7Z5J4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAI1Q7Z5J4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAI1Q7Z5J4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAI1Q7Z5J4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAI1Q7Z5J4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.93■□□□□ 0.46
RAI1Q7Z5J4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
RAI1Q7Z5J4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAI1Q7Z5J4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.93■□□□□ 0.46
RAI1Q7Z5J4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
RAI1Q7Z5J4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.93■□□□□ 0.46
RAI1Q7Z5J4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.93■□□□□ 0.46
RAI1Q7Z5J4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.93■□□□□ 0.46
RAI1Q7Z5J4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RAI1Q7Z5J4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAI1Q7Z5J4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAI1Q7Z5J4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.92■□□□□ 0.46
RAI1Q7Z5J4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 KRT18P29-201ENST00000397031 1267 ntBASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 AC091799.1-201ENST00000422823 811 ntBASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 AL591742.1-201ENST00000604433 565 ntBASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 AC003102.1-202ENST00000563394 1796 ntBASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 C11orf96-202ENST00000528572 1834 ntBASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAI1Q7Z5J4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAI1Q7Z5J4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms