Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF111Q6ZNA4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF111Q6ZNA4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF111Q6ZNA4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF111Q6ZNA4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF111Q6ZNA4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RNF111Q6ZNA4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 OXCT2P1-201ENST00000447263 1535 ntBASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF111Q6ZNA4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF111Q6ZNA4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RNF111Q6ZNA4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.23■□□□□ 0.83
RNF111Q6ZNA4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
RNF111Q6ZNA4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF111Q6ZNA4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF111Q6ZNA4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF111Q6ZNA4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF111Q6ZNA4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.23■□□□□ 0.83
RNF111Q6ZNA4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
RNF111Q6ZNA4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF111Q6ZNA4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF111Q6ZNA4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF111Q6ZNA4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF111Q6ZNA4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF111Q6ZNA4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF111Q6ZNA4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RNF111Q6ZNA4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF111Q6ZNA4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF111Q6ZNA4 AP005212.1-201ENST00000581547 1997 ntBASIC20.23■□□□□ 0.83
RNF111Q6ZNA4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF111Q6ZNA4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF111Q6ZNA4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF111Q6ZNA4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF111Q6ZNA4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF111Q6ZNA4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.22■□□□□ 0.83
RNF111Q6ZNA4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RNF111Q6ZNA4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF111Q6ZNA4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF111Q6ZNA4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF111Q6ZNA4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.22■□□□□ 0.83
RNF111Q6ZNA4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RNF111Q6ZNA4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
RNF111Q6ZNA4 AC073314.1-201ENST00000568729 2216 ntBASIC20.22■□□□□ 0.83
RNF111Q6ZNA4 GABARAPL3-202ENST00000624044 1851 ntBASIC20.22■□□□□ 0.83
RNF111Q6ZNA4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF111Q6ZNA4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RNF111Q6ZNA4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF111Q6ZNA4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF111Q6ZNA4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF111Q6ZNA4 IRS3P-201ENST00000223076 1006 ntBASIC20.21■□□□□ 0.83
RNF111Q6ZNA4 MIR572-201ENST00000384983 95 ntBASIC20.21■□□□□ 0.83
RNF111Q6ZNA4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF111Q6ZNA4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF111Q6ZNA4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF111Q6ZNA4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF111Q6ZNA4 AC079089.2-201ENST00000531211 1277 ntBASIC20.21■□□□□ 0.83
RNF111Q6ZNA4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF111Q6ZNA4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.21■□□□□ 0.83
RNF111Q6ZNA4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF111Q6ZNA4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF111Q6ZNA4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF111Q6ZNA4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RNF111Q6ZNA4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF111Q6ZNA4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF111Q6ZNA4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF111Q6ZNA4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF111Q6ZNA4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
RNF111Q6ZNA4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF111Q6ZNA4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF111Q6ZNA4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF111Q6ZNA4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF111Q6ZNA4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF111Q6ZNA4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF111Q6ZNA4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.2■□□□□ 0.82
RNF111Q6ZNA4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF111Q6ZNA4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.2■□□□□ 0.82
RNF111Q6ZNA4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms