Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.75■□□□□ 0.59
NHLRC1Q6VVB1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.75■□□□□ 0.59
NHLRC1Q6VVB1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NHLRC1Q6VVB1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
NHLRC1Q6VVB1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NHLRC1Q6VVB1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.75■□□□□ 0.59
NHLRC1Q6VVB1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NHLRC1Q6VVB1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NHLRC1Q6VVB1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NHLRC1Q6VVB1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NHLRC1Q6VVB1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NHLRC1Q6VVB1 AF106564.1-201ENST00000607058 2553 ntBASIC18.75■□□□□ 0.59
NHLRC1Q6VVB1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 KRT87P-202ENST00000534226 1464 ntBASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NHLRC1Q6VVB1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NHLRC1Q6VVB1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NHLRC1Q6VVB1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
NHLRC1Q6VVB1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NHLRC1Q6VVB1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NHLRC1Q6VVB1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NHLRC1Q6VVB1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NHLRC1Q6VVB1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.73■□□□□ 0.59
NHLRC1Q6VVB1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.73■□□□□ 0.59
NHLRC1Q6VVB1 KRT18P14-201ENST00000534205 1250 ntBASIC18.73■□□□□ 0.59
NHLRC1Q6VVB1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.73■□□□□ 0.59
NHLRC1Q6VVB1 KRT18P61-201ENST00000585825 1298 ntBASIC18.73■□□□□ 0.59
NHLRC1Q6VVB1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.73■□□□□ 0.59
NHLRC1Q6VVB1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NHLRC1Q6VVB1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NHLRC1Q6VVB1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NHLRC1Q6VVB1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NHLRC1Q6VVB1 RNF165-205ENST00000588679 2904 ntBASIC18.73■□□□□ 0.59
NHLRC1Q6VVB1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NHLRC1Q6VVB1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NHLRC1Q6VVB1 AP004607.4-201ENST00000530158 1459 ntBASIC18.72■□□□□ 0.59
NHLRC1Q6VVB1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
NHLRC1Q6VVB1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.72■□□□□ 0.59
NHLRC1Q6VVB1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NHLRC1Q6VVB1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NHLRC1Q6VVB1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NHLRC1Q6VVB1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.72■□□□□ 0.59
NHLRC1Q6VVB1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.72■□□□□ 0.59
NHLRC1Q6VVB1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
NHLRC1Q6VVB1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NHLRC1Q6VVB1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
NHLRC1Q6VVB1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.72■□□□□ 0.59
NHLRC1Q6VVB1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NHLRC1Q6VVB1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 AC097381.1-201ENST00000429019 1296 ntBASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 DUX4L2-201ENST00000561772 1275 ntBASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 AC138907.5-202ENST00000569484 235 ntBASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 DUX4L6-201ENST00000626483 1275 ntBASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 DUX4L1-201ENST00000627662 1275 ntBASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 DUX4L8-201ENST00000629013 1275 ntBASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 DUX4L3-201ENST00000630187 1275 ntBASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 DUX4L7-201ENST00000630678 1275 ntBASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 DUX4L5-201ENST00000630834 1275 ntBASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NHLRC1Q6VVB1 AL049796.1-201ENST00000565336 1766 ntBASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NHLRC1Q6VVB1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms