Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.65■□□□□ 0.9
LYSMD4Q5XG99 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.65■□□□□ 0.9
LYSMD4Q5XG99 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.65■□□□□ 0.9
LYSMD4Q5XG99 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LYSMD4Q5XG99 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
LYSMD4Q5XG99 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LYSMD4Q5XG99 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.64■□□□□ 0.89
LYSMD4Q5XG99 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LYSMD4Q5XG99 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LYSMD4Q5XG99 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LYSMD4Q5XG99 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
LYSMD4Q5XG99 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LYSMD4Q5XG99 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.64■□□□□ 0.89
LYSMD4Q5XG99 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LYSMD4Q5XG99 KRT18P68-201ENST00000392293 1000 ntBASIC20.64■□□□□ 0.89
LYSMD4Q5XG99 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.64■□□□□ 0.89
LYSMD4Q5XG99 MIR4497-201ENST00000583208 89 ntBASIC20.64■□□□□ 0.89
LYSMD4Q5XG99 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.64■□□□□ 0.89
LYSMD4Q5XG99 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.64■□□□□ 0.89
LYSMD4Q5XG99 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LYSMD4Q5XG99 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LYSMD4Q5XG99 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LYSMD4Q5XG99 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
LYSMD4Q5XG99 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LYSMD4Q5XG99 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
LYSMD4Q5XG99 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LYSMD4Q5XG99 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LYSMD4Q5XG99 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LYSMD4Q5XG99 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LYSMD4Q5XG99 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LYSMD4Q5XG99 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LYSMD4Q5XG99 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.63■□□□□ 0.89
LYSMD4Q5XG99 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.63■□□□□ 0.89
LYSMD4Q5XG99 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.63■□□□□ 0.89
LYSMD4Q5XG99 RN7SL471P-201ENST00000580476 299 ntBASIC20.63■□□□□ 0.89
LYSMD4Q5XG99 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.63■□□□□ 0.89
LYSMD4Q5XG99 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LYSMD4Q5XG99 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.63■□□□□ 0.89
LYSMD4Q5XG99 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LYSMD4Q5XG99 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD4Q5XG99 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD4Q5XG99 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD4Q5XG99 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD4Q5XG99 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.62■□□□□ 0.89
LYSMD4Q5XG99 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.62■□□□□ 0.89
LYSMD4Q5XG99 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.62■□□□□ 0.89
LYSMD4Q5XG99 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.62■□□□□ 0.89
LYSMD4Q5XG99 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD4Q5XG99 SOX15-203ENST00000570788 1093 ntBASIC20.62■□□□□ 0.89
LYSMD4Q5XG99 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
LYSMD4Q5XG99 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.62■□□□□ 0.89
LYSMD4Q5XG99 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD4Q5XG99 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.62■□□□□ 0.89
LYSMD4Q5XG99 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.62■□□□□ 0.89
LYSMD4Q5XG99 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD4Q5XG99 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD4Q5XG99 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD4Q5XG99 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.62■□□□□ 0.89
LYSMD4Q5XG99 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.62■□□□□ 0.89
LYSMD4Q5XG99 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.61■□□□□ 0.89
LYSMD4Q5XG99 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LYSMD4Q5XG99 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LYSMD4Q5XG99 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
LYSMD4Q5XG99 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LYSMD4Q5XG99 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.61■□□□□ 0.89
LYSMD4Q5XG99 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.61■□□□□ 0.89
LYSMD4Q5XG99 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.61■□□□□ 0.89
LYSMD4Q5XG99 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.61■□□□□ 0.89
LYSMD4Q5XG99 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.61■□□□□ 0.89
LYSMD4Q5XG99 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LYSMD4Q5XG99 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LYSMD4Q5XG99 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.61■□□□□ 0.89
LYSMD4Q5XG99 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
LYSMD4Q5XG99 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LYSMD4Q5XG99 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 AC092053.2-201ENST00000640557 1818 ntBASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 AC073912.3-201ENST00000624414 853 ntBASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD4Q5XG99 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD4Q5XG99 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms