Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCSMST1Q4G0I0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCSMST1Q4G0I0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCSMST1Q4G0I0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCSMST1Q4G0I0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CCSMST1Q4G0I0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.34■□□□□ 0.85
CCSMST1Q4G0I0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.34■□□□□ 0.85
CCSMST1Q4G0I0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCSMST1Q4G0I0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCSMST1Q4G0I0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CCSMST1Q4G0I0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCSMST1Q4G0I0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CCSMST1Q4G0I0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.33■□□□□ 0.85
CCSMST1Q4G0I0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCSMST1Q4G0I0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCSMST1Q4G0I0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CCSMST1Q4G0I0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.33■□□□□ 0.85
CCSMST1Q4G0I0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCSMST1Q4G0I0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.33■□□□□ 0.85
CCSMST1Q4G0I0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.33■□□□□ 0.85
CCSMST1Q4G0I0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.33■□□□□ 0.85
CCSMST1Q4G0I0 KRT18P20-201ENST00000548986 1279 ntBASIC20.33■□□□□ 0.85
CCSMST1Q4G0I0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCSMST1Q4G0I0 AC092437.1-201ENST00000624794 1048 ntBASIC20.33■□□□□ 0.85
CCSMST1Q4G0I0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CCSMST1Q4G0I0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCSMST1Q4G0I0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.33■□□□□ 0.84
CCSMST1Q4G0I0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 KRT16P2-201ENST00000414673 1423 ntBASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCSMST1Q4G0I0 AL049796.1-201ENST00000565336 1766 ntBASIC20.31■□□□□ 0.84
CCSMST1Q4G0I0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCSMST1Q4G0I0 AC006015.1-201ENST00000429970 570 ntBASIC20.31■□□□□ 0.84
CCSMST1Q4G0I0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.31■□□□□ 0.84
CCSMST1Q4G0I0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.31■□□□□ 0.84
CCSMST1Q4G0I0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.31■□□□□ 0.84
CCSMST1Q4G0I0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.31■□□□□ 0.84
CCSMST1Q4G0I0 MYCNOS-205ENST00000641950 531 ntBASIC20.31■□□□□ 0.84
CCSMST1Q4G0I0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCSMST1Q4G0I0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCSMST1Q4G0I0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.31■□□□□ 0.84
CCSMST1Q4G0I0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCSMST1Q4G0I0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.3■□□□□ 0.84
CCSMST1Q4G0I0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCSMST1Q4G0I0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.3■□□□□ 0.84
CCSMST1Q4G0I0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCSMST1Q4G0I0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCSMST1Q4G0I0 AC016769.1-201ENST00000409132 1010 ntBASIC20.3■□□□□ 0.84
CCSMST1Q4G0I0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.3■□□□□ 0.84
CCSMST1Q4G0I0 AC120498.10-201ENST00000621827 505 ntBASIC20.3■□□□□ 0.84
CCSMST1Q4G0I0 RARRES2P11-201ENST00000635158 484 ntBASIC20.3■□□□□ 0.84
CCSMST1Q4G0I0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCSMST1Q4G0I0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CCSMST1Q4G0I0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCSMST1Q4G0I0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
CCSMST1Q4G0I0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.29■□□□□ 0.84
CCSMST1Q4G0I0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCSMST1Q4G0I0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.29■□□□□ 0.84
CCSMST1Q4G0I0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CCSMST1Q4G0I0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CCSMST1Q4G0I0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCSMST1Q4G0I0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCSMST1Q4G0I0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.29■□□□□ 0.84
CCSMST1Q4G0I0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCSMST1Q4G0I0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.29■□□□□ 0.84
CCSMST1Q4G0I0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCSMST1Q4G0I0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.29■□□□□ 0.84
CCSMST1Q4G0I0 AC011767.1-201ENST00000617410 1153 ntBASIC20.29■□□□□ 0.84
CCSMST1Q4G0I0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.29■□□□□ 0.84
CCSMST1Q4G0I0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCSMST1Q4G0I0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCSMST1Q4G0I0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CCSMST1Q4G0I0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCSMST1Q4G0I0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCSMST1Q4G0I0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.28■□□□□ 0.84
CCSMST1Q4G0I0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CCSMST1Q4G0I0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 160.3 ms