Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNAI3Q3KNW1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.11■□□□□ 0.49
SNAI3Q3KNW1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNAI3Q3KNW1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNAI3Q3KNW1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNAI3Q3KNW1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNAI3Q3KNW1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNAI3Q3KNW1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAI3Q3KNW1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.1■□□□□ 0.49
SNAI3Q3KNW1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNAI3Q3KNW1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAI3Q3KNW1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SNAI3Q3KNW1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAI3Q3KNW1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAI3Q3KNW1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.1■□□□□ 0.49
SNAI3Q3KNW1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.1■□□□□ 0.49
SNAI3Q3KNW1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.1■□□□□ 0.49
SNAI3Q3KNW1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.1■□□□□ 0.49
SNAI3Q3KNW1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAI3Q3KNW1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.1■□□□□ 0.49
SNAI3Q3KNW1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.1■□□□□ 0.49
SNAI3Q3KNW1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAI3Q3KNW1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.1■□□□□ 0.49
SNAI3Q3KNW1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.1■□□□□ 0.49
SNAI3Q3KNW1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.1■□□□□ 0.49
SNAI3Q3KNW1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SNAI3Q3KNW1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SNAI3Q3KNW1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAI3Q3KNW1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI3Q3KNW1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNAI3Q3KNW1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNAI3Q3KNW1 AP004607.4-201ENST00000530158 1459 ntBASIC18.08■□□□□ 0.49
SNAI3Q3KNW1 PLK5-205ENST00000642079 1969 ntBASIC18.08■□□□□ 0.49
SNAI3Q3KNW1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.08■□□□□ 0.49
SNAI3Q3KNW1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNAI3Q3KNW1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNAI3Q3KNW1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.08■□□□□ 0.48
SNAI3Q3KNW1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNAI3Q3KNW1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SNAI3Q3KNW1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNAI3Q3KNW1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.08■□□□□ 0.48
SNAI3Q3KNW1 KRT18P14-201ENST00000534205 1250 ntBASIC18.08■□□□□ 0.48
SNAI3Q3KNW1 AC138907.5-202ENST00000569484 235 ntBASIC18.08■□□□□ 0.48
SNAI3Q3KNW1 AC104187.1-201ENST00000607510 612 ntBASIC18.08■□□□□ 0.48
SNAI3Q3KNW1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SNAI3Q3KNW1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SNAI3Q3KNW1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNAI3Q3KNW1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNAI3Q3KNW1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNAI3Q3KNW1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNAI3Q3KNW1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNAI3Q3KNW1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.08■□□□□ 0.48
SNAI3Q3KNW1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 AC008175.2-201ENST00000612840 297 ntBASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNAI3Q3KNW1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms