Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 DUX4L2-201ENST00000561772 1275 ntBASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 DUX4L6-201ENST00000626483 1275 ntBASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 DUX4L1-201ENST00000627662 1275 ntBASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 DUX4L8-201ENST00000629013 1275 ntBASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 DUX4L3-201ENST00000630187 1275 ntBASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 DUX4L7-201ENST00000630678 1275 ntBASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 DUX4L5-201ENST00000630834 1275 ntBASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RSPO1Q2MKA7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 SLC7A5P2-201ENST00000553010 536 ntBASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 AP001160.3-201ENST00000601484 763 ntBASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 AC008175.2-201ENST00000612840 297 ntBASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.13■□□□□ 0.49
RSPO1Q2MKA7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.12■□□□□ 0.49
RSPO1Q2MKA7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.12■□□□□ 0.49
RSPO1Q2MKA7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.12■□□□□ 0.49
RSPO1Q2MKA7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RSPO1Q2MKA7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RSPO1Q2MKA7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.12■□□□□ 0.49
RSPO1Q2MKA7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.12■□□□□ 0.49
RSPO1Q2MKA7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RSPO1Q2MKA7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.12■□□□□ 0.49
RSPO1Q2MKA7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RSPO1Q2MKA7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RSPO1Q2MKA7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.12■□□□□ 0.49
RSPO1Q2MKA7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.12■□□□□ 0.49
RSPO1Q2MKA7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RSPO1Q2MKA7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 AC097381.1-201ENST00000429019 1296 ntBASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 RARRES2P11-201ENST00000635158 484 ntBASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 AC121338.2-201ENST00000622535 1744 ntBASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RSPO1Q2MKA7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RSPO1Q2MKA7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RSPO1Q2MKA7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RSPO1Q2MKA7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RSPO1Q2MKA7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.1■□□□□ 0.49
RSPO1Q2MKA7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RSPO1Q2MKA7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RSPO1Q2MKA7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RSPO1Q2MKA7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RSPO1Q2MKA7 AC006128.1-201ENST00000624704 1661 ntBASIC18.1■□□□□ 0.49
RSPO1Q2MKA7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RSPO1Q2MKA7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RSPO1Q2MKA7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RSPO1Q2MKA7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.1■□□□□ 0.49
RSPO1Q2MKA7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RSPO1Q2MKA7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RSPO1Q2MKA7 AL157384.1-201ENST00000445995 2473 ntBASIC18.1■□□□□ 0.49
RSPO1Q2MKA7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms