Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC24.55■■□□□ 1.52
SHROOM1Q2M3G4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SHROOM1Q2M3G4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SHROOM1Q2M3G4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SHROOM1Q2M3G4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
SHROOM1Q2M3G4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC24.54■■□□□ 1.52
SHROOM1Q2M3G4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
SHROOM1Q2M3G4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC24.54■■□□□ 1.52
SHROOM1Q2M3G4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC24.54■■□□□ 1.52
SHROOM1Q2M3G4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC24.54■■□□□ 1.52
SHROOM1Q2M3G4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
SHROOM1Q2M3G4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SHROOM1Q2M3G4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SHROOM1Q2M3G4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
SHROOM1Q2M3G4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SHROOM1Q2M3G4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
SHROOM1Q2M3G4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SHROOM1Q2M3G4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SHROOM1Q2M3G4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC24.53■■□□□ 1.52
SHROOM1Q2M3G4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC24.53■■□□□ 1.52
SHROOM1Q2M3G4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SHROOM1Q2M3G4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC24.53■■□□□ 1.52
SHROOM1Q2M3G4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC24.53■■□□□ 1.52
SHROOM1Q2M3G4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
SHROOM1Q2M3G4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SHROOM1Q2M3G4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
SHROOM1Q2M3G4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SHROOM1Q2M3G4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC24.52■■□□□ 1.52
SHROOM1Q2M3G4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SHROOM1Q2M3G4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
SHROOM1Q2M3G4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SHROOM1Q2M3G4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SHROOM1Q2M3G4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SHROOM1Q2M3G4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC24.52■■□□□ 1.52
SHROOM1Q2M3G4 AC097658.1-201ENST00000475555 843 ntBASIC24.52■■□□□ 1.52
SHROOM1Q2M3G4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC24.52■■□□□ 1.52
SHROOM1Q2M3G4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC24.52■■□□□ 1.52
SHROOM1Q2M3G4 ITM2C-210ENST00000620962 501 ntBASIC24.52■■□□□ 1.52
SHROOM1Q2M3G4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC24.52■■□□□ 1.52
SHROOM1Q2M3G4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SHROOM1Q2M3G4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
SHROOM1Q2M3G4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SHROOM1Q2M3G4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SHROOM1Q2M3G4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
SHROOM1Q2M3G4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SHROOM1Q2M3G4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SHROOM1Q2M3G4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SHROOM1Q2M3G4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
SHROOM1Q2M3G4 AC098590.1-201ENST00000468126 897 ntBASIC24.51■■□□□ 1.51
SHROOM1Q2M3G4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC24.51■■□□□ 1.51
SHROOM1Q2M3G4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SHROOM1Q2M3G4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC24.51■■□□□ 1.51
SHROOM1Q2M3G4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC24.51■■□□□ 1.51
SHROOM1Q2M3G4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC24.51■■□□□ 1.51
SHROOM1Q2M3G4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
SHROOM1Q2M3G4 GUSBP5-202ENST00000510805 1989 ntBASIC24.51■■□□□ 1.51
SHROOM1Q2M3G4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SHROOM1Q2M3G4 AC233723.2-201ENST00000623798 2106 ntBASIC24.5■■□□□ 1.51
SHROOM1Q2M3G4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
SHROOM1Q2M3G4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SHROOM1Q2M3G4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SHROOM1Q2M3G4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
SHROOM1Q2M3G4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC24.5■■□□□ 1.51
SHROOM1Q2M3G4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
SHROOM1Q2M3G4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC24.5■■□□□ 1.51
SHROOM1Q2M3G4 DET1-205ENST00000558413 583 ntTSL 4 BASIC24.5■■□□□ 1.51
SHROOM1Q2M3G4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC24.5■■□□□ 1.51
SHROOM1Q2M3G4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SHROOM1Q2M3G4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SHROOM1Q2M3G4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SHROOM1Q2M3G4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SHROOM1Q2M3G4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SHROOM1Q2M3G4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SHROOM1Q2M3G4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC24.5■■□□□ 1.51
SHROOM1Q2M3G4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SHROOM1Q2M3G4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SHROOM1Q2M3G4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SHROOM1Q2M3G4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SHROOM1Q2M3G4 RPS2P52-201ENST00000469610 820 ntBASIC24.49■■□□□ 1.51
SHROOM1Q2M3G4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC24.49■■□□□ 1.51
SHROOM1Q2M3G4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC24.49■■□□□ 1.51
SHROOM1Q2M3G4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC24.49■■□□□ 1.51
SHROOM1Q2M3G4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC24.49■■□□□ 1.51
SHROOM1Q2M3G4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SHROOM1Q2M3G4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC24.49■■□□□ 1.51
SHROOM1Q2M3G4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC24.49■■□□□ 1.51
SHROOM1Q2M3G4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SHROOM1Q2M3G4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
SHROOM1Q2M3G4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC24.49■■□□□ 1.51
SHROOM1Q2M3G4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SHROOM1Q2M3G4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SHROOM1Q2M3G4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC24.49■■□□□ 1.51
SHROOM1Q2M3G4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.48■■□□□ 1.51
SHROOM1Q2M3G4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SHROOM1Q2M3G4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC24.48■■□□□ 1.51
SHROOM1Q2M3G4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.48■■□□□ 1.51
SHROOM1Q2M3G4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC24.48■■□□□ 1.51
SHROOM1Q2M3G4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SHROOM1Q2M3G4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SHROOM1Q2M3G4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms